RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 BPIFA2Q96DR5 249 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 LRR1Q96L50 414 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 GTPBP1O00178 669 aaKnown RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 OR2J2O76002 312 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 STK17BO94768 372 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 GSTT1P30711 240 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 SKP2Q13309 424 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 C3orf38Q5JPI3 329 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 YOD1Q5VVQ6 348 aaPredicted RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 C1QL3Q5VWW1 255 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 SLX4IPQ5VYV7 408 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 GTF2IRD2BQ6EKJ0 949 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 CPEB2Q7Z5Q1 589 aaKnown RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 GTF2IRD2Q86UP8 949 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 SMAP2Q8WU79 429 aaPredicted RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 LPAR4Q99677 370 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 TMEM27Q9HBJ8 222 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 WARS2Q9UGM6 360 aaKnown RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 CLEC2DQ9UHP7 191 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 FBXL4Q9UKA2 621 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 PCDHGA5Q9Y5G8 931 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 KLF4O43474 513 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 CDC40O60508 579 aaKnown RBP eCLIP7.82□□□□□ -1.16
TRIO-201ENST00000344135 KLK3P07288 261 aaPredicted RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 GALNSP34059 522 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 MC2RQ01718 297 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 BTBD16Q32M84 506 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 FNDC7Q5VTL7 733 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 CASP12Q6UXS9 341 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 DUSP19Q8WTR2 217 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 DGCR14Q96DF8 476 aaKnown RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 FOXJ2Q9P0K8 574 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 TESQ9UGI8 421 aaKnown RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 RP1L1Q8IWN7 2480 aaPredicted RBP7.82□□□□□ -1.16
TRIO-201ENST00000344135 ACACAQ13085 2346 aa7.82□□□□□ -1.16
TRIO-201ENST00000344135 ANKRD11Q6UB99 2663 aaPredicted RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 SAGE2PA6NJ88 616 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TSPAN2O60636 221 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ZNF806P0C7X5 589 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 UBL4AP11441 157 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 PSMB9P28065 219 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 IFNA8P32881 189 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 NUP107P57740 925 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ZNF620Q6ZNG0 422 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ZNF441Q8N8Z8 693 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CYB561A3Q8NBI2 242 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SLC39A7Q92504 469 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 DACT3Q96B18 629 aaPredicted RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 NACC2Q96BF6 587 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 C3orf49Q96BT1 292 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TNFRSF13CQ96RJ3 184 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 HCAR1Q9BXC0 346 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 OR52D1Q9H346 318 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 HHATLQ9HCP6 504 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TMEM9BQ9NQ34 198 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TBC1D23Q9NUY8 699 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ANKRD10Q9NXR5 420 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SCN3BQ9NY72 215 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 PSORS1C1Q9UIG5 152 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 RELNP78509 3460 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 APC2O95996 2303 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 LRRTM2O43300 516 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 RGS10O43665 173 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SERPINI2O75830 405 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ATE1O95260 518 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 PTHP01270 115 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 IFI6P09912 130 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CLUP10909 449 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 HOXD11P31277 338 aaPredicted RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 FOXK1P85037 733 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CDK5Q00535 292 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TCF15Q12870 199 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ISXQ2M1V0 245 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 C12orf73Q69YU5 71 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 THOC7Q6I9Y2 204 aaKnown RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 RPL3LQ92901 407 aaKnown RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 ZNF566Q969W8 418 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ISOC1Q96CN7 298 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 POLE3Q9NRF9 147 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SEC14L4Q9UDX3 406 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SNX5Q9Y5X3 404 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 NPFFR2Q9Y5X5 522 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 HS3ST3B1Q9Y662 390 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CLCA1A8K7I4 914 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 C9orf172C9J069 976 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 ZNF264O43296 627 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CHP2O43745 196 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 CSO75390 466 aaKnown RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 GP1BAP07359 652 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TBXA2RP21731 343 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 F8A1P23610 371 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 PSMD7P51665 324 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SLC26A5P58743 744 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SOWAHCQ53LP3 525 aaPredicted RBP7.81□□□□□ -1.16
TRIO-201ENST00000344135 SYT14P1Q58G82 188 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 SLC27A4Q6P1M0 643 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 GRAMD2AQ8IUY3 354 aa7.81□□□□□ -1.16
TRIO-201ENST00000344135 TEX47Q8TBZ9 253 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms