RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 FABP9Q0Z7S8 132 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 TDGQ13569 410 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 RAB33AQ14088 237 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 HMGN3Q15651 99 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 RNASE12Q5GAN4 147 aaKnown RBP7.57□□□□□ -1.2
ATG4A-201ENST00000343524 C1orf94Q6P1W5 598 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 NR2C2APQ86WQ0 139 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 CIR1Q86X95 450 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-201ENST00000343524 KDF1Q8NAX2 398 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-201ENST00000343524 CCDC107Q8WV48 283 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 LURAP1Q96LR2 239 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 DMRTA2Q96SC8 542 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF607Q96SK3 696 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 A4GALTQ9NPC4 353 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 MMP26Q9NRE1 261 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 FAM86C1Q9NVL1 165 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 TAS2R10Q9NYW0 307 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 H2AFY2Q9P0M6 372 aaPredicted RBP7.57□□□□□ -1.2
ATG4A-201ENST00000343524 PLXNB2O15031 1838 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 ZDBF2Q9HCK1 2354 aa7.57□□□□□ -1.2
ATG4A-201ENST00000343524 PKD1L2Q7Z442 2459 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 A0A0G2JK05 382 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ABHD14A-ACY1A0A1B0GW23 586 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ANKRD20A5PA0PJZ0 165 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 C9orf170A2RU37 121 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FAM227AF5H4B4 570 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 INSIG1O15503 277 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FLRT2O43155 660 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 POP4O95707 220 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 LATS1O95835 1130 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 CD2P06729 351 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC2A1P11166 492 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 EPORP19235 508 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 AGAP20933 346 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 IGFBP4P22692 258 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 BDKRB2P30411 391 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 RBP2P50120 134 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZXDBP98169 803 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PTPRRQ15256 657 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF791Q3KP31 576 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ACER2Q5QJU3 275 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 COX20Q5RI15 118 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 MFSD14CQ5VZR4 134 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FAM180BQ6P0A1 224 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PRSS55Q6UWB4 352 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 APOOLQ6UXV4 268 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FAM83HQ6ZRV2 1179 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 UBE2R2Q712K3 238 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 OR2W3Q7Z3T1 314 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ADCK2Q7Z695 626 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PXKQ7Z7A4 578 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PARGQ86W56 976 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF683Q8IZ20 524 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 STOML3Q8TAV4 291 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TNFAIP8L1Q8WVP5 186 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ACOT11Q8WXI4 607 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ELF4Q99607 663 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 NDC1Q9BTX1 674 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 WRAP53Q9BUR4 548 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FNDC11Q9BVV2 318 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TWSG1Q9GZX9 223 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ABCG8Q9H221 673 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 CHMP1AQ9HD42 196 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ASF1BQ9NVP2 202 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TAS2R8Q9NYW2 309 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 GJD2Q9UKL4 321 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TDRD15B5MCY1 1934 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 DOCK3Q8IZD9 2030 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 IQCF5A8MTL0 148 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ACOT7O00154 380 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 AP4M1O00189 453 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC16A5O15375 505 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TXNL1O43396 289 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 PLPP2O43688 288 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC25A14O95258 325 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 VNN2O95498 520 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 EPHX1P07099 455 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 IGFBP1P08833 259 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 OR12D1P0DN82 309 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC25A4P12235 298 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ADCYAP1P18509 176 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 RCC1P18754 421 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SHC1P29353 583 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 MAT2AP31153 395 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TIA1P31483 386 aaKnown RBP eCLIP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC6A12P48065 614 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC6A11P48066 632 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ANXA11P50995 505 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 DGKEP52429 567 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF239Q16600 458 aaKnown RBP7.56□□□□□ -1.2
ATG4A-201ENST00000343524 SLC5A12Q1EHB4 618 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 NDUFAF6Q330K2 333 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TIGD5Q53EQ6 642 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 MPPE1Q53F39 396 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 ACSM5Q6NUN0 579 aa7.56□□□□□ -1.2
ATG4A-201ENST00000343524 TCTN3Q6NUS6 607 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms