RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 DCNP07585 359 aaKnown RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ADAMTSL4Q6UY14 1074 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 RGCCQ9H4X1 137 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 CXCR4P61073 352 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 LRRC18Q8N456 261 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 OR13H1Q8NG92 308 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 SLC6A17Q9H1V8 727 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ARFGEF2Q9Y6D5 1785 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 TMEM269A0A1B0GVZ9 245 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 TLCD2A6NGC4 264 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 DDAH2O95865 285 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 GYPBP06028 91 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ATXN1LP0C7T5 689 aaKnown RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 MTHFD2P13995 350 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
UBE3B-202ENST00000342494 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-202ENST00000342494 B4DXG7 233 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 D6RAR5 112 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 KLRC4-KLRK1H3BQV0 150 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF780AO75290 641 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-202ENST00000342494 TPOP07202 933 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 HOXA9P31269 272 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 IRS1P35568 1242 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 EFNA3P52797 238 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 BCL2A1Q16548 175 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 SLC22A6Q4U2R8 563 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 RNF175Q8N4F7 328 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 MAFIPQ8WZ33 124 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF597Q96LX8 424 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 OR5B12Q96R08 314 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF649Q9BS31 505 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 SAP130Q9H0E3 1048 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 THSD1Q9NS62 852 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 NUP188Q5SRE5 1749 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 RPP30P78346 268 aaKnown RBP14.02□□□□□ -0.16
UBE3B-202ENST00000342494 SYPL1Q16563 259 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 SLC22A10Q63ZE4 541 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 ZNF322Q6U7Q0 402 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-202ENST00000342494 DCAF13Q9NV06 445 aaKnown RBP14.02□□□□□ -0.16
UBE3B-202ENST00000342494 SLC22A7Q9Y694 548 aa14.02□□□□□ -0.16
UBE3B-202ENST00000342494 C4BP0C0L5 1744 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 ARSBP15848 533 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 CAV3P56539 151 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 CLDN17P56750 224 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 PROX2Q3B8N5 592 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 C6orf89Q6UWU4 347 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 ITFG2Q969R8 447 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 PDLIM5Q96HC4 596 aaKnown RBP14.02□□□□□ -0.17
UBE3B-202ENST00000342494 SLC25A18Q9H1K4 315 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 TM7SF3Q9NS93 570 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM100Q9NV29 134 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 IL37Q9NZH6 218 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 TESQ9UGI8 421 aaKnown RBP14.02□□□□□ -0.17
UBE3B-202ENST00000342494 SUSD5O60279 629 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 CAMLGP49069 296 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 AADACL4Q5VUY2 407 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 NIPAL3Q6P499 406 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 MISPQ8IVT2 679 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 FAM160A2Q8N612 972 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-202ENST00000342494 OR5T1Q8NG75 326 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 PHB2Q99623 299 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 VRK1Q99986 396 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-202ENST00000342494 SEMA6CQ9H3T2 930 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 HS3ST3A1Q9Y663 406 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 DVL2O14641 736 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 TIMM8AO60220 97 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-202ENST00000342494 DPP4P27487 766 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 IL2RGP31785 369 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 METTL4Q8N3J2 472 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 FUNDC2Q9BWH2 189 aa14.02□□□□□ -0.17
UBE3B-202ENST00000342494 A0A1B0GV50 99 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 HTR2AP28223 471 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 TMEM165Q9HC07 324 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 LSM5Q9Y4Y9 91 aaKnown RBP14.01□□□□□ -0.17
UBE3B-202ENST00000342494 SHISA7A6NL88 538 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 CD300LBA8K4G0 201 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 TPMTP51580 245 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 PDE7AQ13946 482 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 AKR1C8PQ5T2L2 129 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 MRPL2Q5T653 305 aaKnown RBP14.01□□□□□ -0.17
UBE3B-202ENST00000342494 SLC6A19Q695T7 634 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 ESX1Q8N693 406 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 ADAMTS19Q8TE59 1207 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF566Q969W8 418 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 EGLN2Q96KS0 407 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 ZNF681Q96N22 645 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 DDX31Q9H8H2 851 aaKnown RBP14.01□□□□□ -0.17
UBE3B-202ENST00000342494 CALHM2Q9HA72 323 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 MRPS2Q9Y399 296 aaKnown RBP14.01□□□□□ -0.17
UBE3B-202ENST00000342494 MYH11P35749 1972 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 DLG5Q8TDM6 1919 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 RAB3DO95716 219 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 F13BP05160 661 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 BMP2P12643 396 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 GPX3P22352 226 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 MEX3BQ6ZN04 569 aaKnown RBP14.01□□□□□ -0.17
UBE3B-202ENST00000342494 OR1J2Q8NGS2 313 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 ELSPBP1Q96BH3 223 aa14.01□□□□□ -0.17
UBE3B-202ENST00000342494 PRMT8Q9NR22 394 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms