RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PLEKHS1Q5SXH7 462 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ZDHHC20Q5W0Z9 365 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 C18orf63Q68DL7 685 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 KRT77Q7Z794 578 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 SIRT6Q8N6T7 355 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 OR4D9Q8NGE8 314 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 ARL11Q969Q4 196 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 PCNTO95613 3336 aa17.22■□□□□ 0.35
SMPD1-201ENST00000342245 COLCA2A8K830 154 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 ACOT7O00154 380 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 GJA5P36382 358 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 MTFR2Q6P444 385 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 C11orf88Q6PI97 169 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 OR51G2Q8NGK0 314 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 OR1S2Q8NGQ3 325 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 TMEM121BQ9BXQ6 578 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-201ENST00000342245 ZDHHC5Q9C0B5 715 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 SMCO4Q9NRQ5 59 aa17.21■□□□□ 0.35
SMPD1-201ENST00000342245 RHPN2P1A8MT19 583 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ANHXE9PGG2 379 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 LATS1O95835 1130 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ALPPL2P10696 532 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 BDKRB2P30411 391 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 RPS13P62277 151 aaKnown RBP17.21■□□□□ 0.34
SMPD1-201ENST00000342245 TUSC3Q13454 348 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 PGGHGQ32M88 737 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF805Q5CZA5 627 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 SPRYD7Q5W111 196 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF813Q6ZN06 617 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ESPNLQ6ZVH7 1005 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 GAREM2Q75VX8 874 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 TNFAIP8L1Q8WVP5 186 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ADAT1Q9BUB4 502 aaKnown RBP17.21■□□□□ 0.34
SMPD1-201ENST00000342245 ALX4Q9H161 411 aaPredicted RBP17.21■□□□□ 0.34
SMPD1-201ENST00000342245 TMPRSS5Q9H3S3 457 aa17.21■□□□□ 0.34
SMPD1-201ENST00000342245 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 FOXE1O00358 373 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 CLDN11O75508 207 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 KLK3P07288 261 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 MMP3P08254 477 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 CSF2RBP32927 897 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 NAE1Q13564 534 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 NKAPLQ5M9Q1 402 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 JMJD6Q6NYC1 403 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 MED27Q6P2C8 311 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 COMMD6Q7Z4G1 85 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 CFAP52Q8N1V2 620 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 LGALS14Q8TCE9 139 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF707Q96C28 371 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 MYEOVQ96EZ4 313 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 ZC3H10Q96K80 434 aaKnown RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 ART5Q96L15 291 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 A0A1B0GWJ7 208 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM200CA6NKL6 621 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 CLN5O75503 358 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 PRAMEF12O95522 483 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 SFTPCP11686 197 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 ABCD3P28288 659 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 KLHL26Q53HC5 615 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 C10orf120Q5SQS8 335 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 TNFAIP8L2Q6P589 184 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-201ENST00000342245 ZSCAN1Q8NBB4 408 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 PIGXQ8TBF5 258 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 OR5P2Q8WZ92 322 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 SCLYQ96I15 445 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 TMEM185BQ9H7F4 350 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 CXorf36Q9H7Y0 433 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 SEMA4GQ9NTN9 838 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 IRAK3Q9Y616 596 aa17.2■□□□□ 0.34
SMPD1-201ENST00000342245 PYCARD-AS1I3L0S3 204 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 FGF16O43320 207 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 ICOSLGO75144 302 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RHOCP08134 193 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RAB40ALP0C0E4 278 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RNF224P0DH78 156 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 VSIG10L2P0DP72 767 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 CBR1P16152 277 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 NPBWR1P48145 328 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 LUMP51884 338 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 ZNF792Q3KQV3 632 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 CLEC12AQ5QGZ9 265 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RAB12Q6IQ22 244 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 FAM111BQ6SJ93 734 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 IZUMO1Q8IYV9 350 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 OR52B4Q8NGK2 314 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 OR4Q3Q8NH05 313 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 DNAJB3Q8WWF6 145 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 RAB40AQ8WXH6 277 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 EDAQ92838 391 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 TIMP4Q99727 224 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 ASF1BQ9NVP2 202 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 DHCR7Q9UBM7 475 aaKnown RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 CKAP5Q14008 2032 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 A0A087WUU8 490 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 M0R3H8 397 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 PRKRAO75569 313 aaKnown RBP17.19■□□□□ 0.34
SMPD1-201ENST00000342245 SLC25A4P12235 298 aa17.19■□□□□ 0.34
SMPD1-201ENST00000342245 PMELP40967 661 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms