RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 EXOSC1Q9Y3B2 195 aaKnown RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 A0A1W2PR48 441 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 HMGB3O15347 200 aaKnown RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 GGT1P19440 569 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 NR1H2P55055 460 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 RNF4P78317 190 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 FAM173AQ9BQD7 235 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 ATP23Q9Y6H3 246 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 TRGV5A0A0B4J1U4 118 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 COL28A1Q2UY09 1125 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 MFSD12Q6NUT3 480 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 HACD2Q6Y1H2 254 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 OR10A2Q9H208 303 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 C15orf41Q9Y2V0 281 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 C12orf71A8MTZ7 269 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 TACR1P25103 407 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 P2RX1P51575 399 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 ARPC4P59998 168 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 QPRTQ15274 297 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 JMJD6Q6NYC1 403 aaPredicted RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 MARCH9Q86YJ5 346 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 COX14Q96I36 57 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 PPP1R35Q8TAP8 253 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 PRRC1Q96M27 445 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 PLEKHA6Q9Y2H5 1048 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 MAGED1Q9Y5V3 778 aaPredicted RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 EIF4E2O60573 245 aaKnown RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 HOXB9P17482 250 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 SLC1A3P43003 542 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 HTR5AP47898 357 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 APOFQ13790 326 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 UBE2Q1Q7Z7E8 422 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 NT5CQ8TCD5 201 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 MAGIXQ9H6Y5 334 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 EME2A4GXA9 379 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 SPINT1O43278 529 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 MEOX1P50221 254 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ALDH3A2P51648 485 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 MESP2Q0VG99 397 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 MAP4K2Q12851 820 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 NFATC3Q12968 1075 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 VEZF1Q14119 521 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ERMP1Q7Z2K6 904 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ZNF565Q8N9K5 539 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 FCGR1BQ92637 280 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 SLC19A3Q9BZV2 496 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 PPICP45877 212 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 LACTB2Q53H82 288 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 PLBD1Q6P4A8 553 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 APLFQ8IW19 511 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 LILRA2Q8N149 483 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 UBASH3BQ8TF42 649 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 STACQ99469 402 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 TRAV36DV7A0A075B6V5 113 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 EVI2BP34910 448 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 PTGS2P35354 604 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 FBXO27Q8NI29 283 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ELP5Q8TE02 316 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ADAMTS16Q8TE57 1224 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 TMEM203Q969S6 136 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 POLE3Q9NRF9 147 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 SLC22A20A6NK97 555 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 GP1BAP07359 652 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 PNLIPP16233 465 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ZNF16P17020 682 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 ELAVL4P26378 380 aaKnown RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 CRISP1P54107 249 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 LINGO2Q7L985 606 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 SERPINA11Q86U17 422 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 ZNF845Q96IR2 970 aaPredicted RBP11.87□□□□□ -0.51
LIN54-201ENST00000340417 CCDC115Q96NT0 180 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 CXorf36Q9H7Y0 433 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 GPR45Q9Y5Y3 372 aa11.87□□□□□ -0.51
LIN54-201ENST00000340417 CENPBD1B2RD01 187 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 AIREO43918 545 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SLC16A7O60669 478 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 ZNF528Q3MIS6 628 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ACER2Q5QJU3 275 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 FAM71E1Q6IPT2 247 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ZNF813Q6ZN06 617 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ABHD11Q8NFV4 315 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 OR51L1Q8NGJ5 315 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 TDRD15B5MCY1 1934 aaKnown RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 CLDN6P56747 220 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SCRN3Q0VDG4 424 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ATAD3CQ5T2N8 411 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms