RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ZNF613Q6PF04 617 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 PLET1Q6UQ28 207 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 BAIAP2L2Q6UXY1 529 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SPATC1Q76KD6 591 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SZRD1Q7Z422 152 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 VN1R4Q7Z5H5 301 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 NOXA1Q86UR1 476 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 LRRC28Q86X40 367 aaPredicted RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 PLCZ1Q86YW0 608 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 GRAMD2AQ8IUY3 354 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 CCDC116Q8IYX3 515 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SLC22A18ASQ8N1D0 253 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 ZNF619Q8N2I2 560 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 C2orf73Q8N5S3 287 aaPredicted RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 ACBD7Q8N6N7 88 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OR52L1Q8NGH7 329 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OR9A2Q8NGT5 310 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OR4C6Q8NH72 309 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 NEIL3Q8TAT5 605 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 CREB3L1Q96BA8 519 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OTULINQ96BN8 352 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 FAM46AQ96IP4 442 aaKnown RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 NEDD4LQ96PU5 975 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 OR2M4Q96R27 311 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SLX1AQ9BQ83 275 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 SLC17A9Q9BYT1 436 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 TRIM36Q9NQ86 728 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 GPR27Q9NS67 375 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 IMP3Q9NV31 184 aaKnown RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 UCKL1Q9NWZ5 548 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 TNFRSF10DQ9UBN6 386 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 WDR45Q9Y484 360 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 DOCK9Q9BZ29 2069 aa9.98□□□□□ -0.81
RTN3-201ENST00000338850 FASNP49327 2511 aaKnown RBP9.98□□□□□ -0.81
RTN3-201ENST00000338850 ADAMTS20P59510 1910 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 A0A087WV48 116 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 GTPBP1O00178 669 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 BHLHE40O14503 412 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 TNFRSF10CO14798 259 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PPM1DO15297 605 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PLPP2O43688 288 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PIAS2O75928 621 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 LYPD3O95274 346 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 ZIC2O95409 532 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 ATP1B1P05026 303 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 CHRM5P08912 532 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 SLC35G6P0C7Q6 338 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 SLC2A2P11168 524 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 NID1P14543 1247 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 HK1P19367 917 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 ALAS2P22557 587 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 TLX1P31314 330 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 TRHRP34981 398 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 RBM34P42696 430 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 NR4A2P43354 598 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 GCGRP47871 477 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTN3-201ENST00000338850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.81
RTN3-201ENST00000338850 YIF1BQ5BJH7 314 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 C18orf63Q68DL7 685 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 BICRALQ6AI39 1079 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 CNIH2Q6PI25 160 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PAMR1Q6UXH9 720 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 ZNF836Q6ZNA1 936 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 Q6ZSR6 202 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 MEPCEQ7L2J0 689 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 CXXC5Q7LFL8 322 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 BCDIN3DQ7Z5W3 292 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 VRK2Q86Y07 508 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 NRMQ8IXM6 262 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 CDRT4Q8N9R6 151 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 C19orf18Q8NEA5 215 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 ATP6V1C2Q8NEY4 427 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 OR4K14Q8NGD5 310 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 FAM174AQ8TBP5 190 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 CAPSLQ8WWF8 208 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PHYHIPQ92561 330 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 UCN3Q969E3 161 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 SLC35A4Q96G79 324 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 C16orf58Q96GQ5 468 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 BMFQ96LC9 184 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 PRSS27Q9BQR3 290 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 C7orf50Q9BRJ6 194 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 APOOQ9BUR5 198 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 UBQLN3Q9H347 655 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 TIGARQ9NQ88 270 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 HINT3Q9NQE9 182 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 RPRD1BQ9NQG5 326 aaKnown RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 CMC2Q9NRP2 79 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 KCMF1Q9P0J7 381 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 H2AFY2Q9P0M6 372 aaPredicted RBP9.97□□□□□ -0.81
RTN3-201ENST00000338850 CARD8Q9Y2G2 431 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 HS3ST3A1Q9Y663 406 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 RNF215Q9Y6U7 377 aa9.97□□□□□ -0.81
RTN3-201ENST00000338850 ARPC4-TTLL3A0A0A6YYG9 625 aa9.96□□□□□ -0.82
RTN3-201ENST00000338850 POM121BA6NF01 834 aa9.96□□□□□ -0.82
RTN3-201ENST00000338850 UNC119BA6NIH7 251 aa9.96□□□□□ -0.82
RTN3-201ENST00000338850 CPSF4LA6NMK7 179 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms