RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 FZD7O75084 574 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 RBBP9O75884 186 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 SCGNO76038 276 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 CD63P08962 238 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 PDHA2P29803 388 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 TAP2Q03519 686 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 OR51L1Q8NGJ5 315 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 WDR20Q8TBZ3 569 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 LMX1AQ8TE12 382 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 TMEM41AQ96HV5 264 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 RBP7Q96R05 134 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 BRF2Q9HAW0 419 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 ALKBH4Q9NXW9 302 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 MYEF2Q9P2K5 600 aaKnown RBP15.05■□□□□ -0
NPHP3-201ENST00000337331 CFDP00746 253 aaPredicted RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 LPLP06858 475 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 PTGER1P34995 402 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 EIF5AP63241 154 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 RBM39Q14498 530 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 ZNF542PQ5EBM4 170 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 SLC9B2Q86UD5 537 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 GPAT4Q86UL3 456 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 TMPRSS12Q86WS5 348 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 GFOD1Q9NXC2 390 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 RNF13O43567 381 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 PRICKLE3O43900 615 aaPredicted RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 RGS9O75916 674 aaPredicted RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 SPARCP09486 303 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 PSMB1P20618 241 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 KCNJ3P48549 501 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 ETFDHQ16134 617 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 RPL13AP3Q6NVV1 102 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 OR6N1Q8NGY5 312 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 CA5BP1Q8WTZ4 195 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 FLVCR2Q9UPI3 526 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 RNASET2O00584 256 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 RNGTTO60942 597 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 KCNK5O95279 499 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 IFNA4P05014 189 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 ITGA5P08648 1049 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 HNRNPA1P09651 372 aaKnown RBP eCLIP15.04■□□□□ -0
NPHP3-201ENST00000337331 GRPRP30550 384 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 HOXA9P31269 272 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 E2F1Q01094 437 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 EOGTQ5NDL2 527 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 TMEM69Q5SWH9 247 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 OR7G2Q8NG99 324 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 OR6S1Q8NH40 331 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 ZNF296Q8WUU4 475 aaPredicted RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 ASB11Q8WXH4 323 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 MYLIPQ8WY64 445 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 SMARCD2Q92925 531 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 PDLIM5Q96HC4 596 aaKnown RBP15.04■□□□□ -0
NPHP3-201ENST00000337331 FN3KQ9H479 309 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 HCFC1R1Q9NWW0 138 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 MEMO1Q9Y316 297 aa15.04■□□□□ -0
NPHP3-201ENST00000337331 FXYD6P3P58550 94 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 MAP4K2Q12851 820 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 CST6Q15828 149 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 XKR7Q5GH72 579 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SFRP5Q5T4F7 317 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 LAIR1Q6GTX8 287 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 PAPD4Q6PIY7 484 aaKnown RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 APOOLQ6UXV4 268 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 KCTD9Q7L273 389 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 CPOQ8IVL8 374 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 DEFB119Q8N690 84 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 CYB561A3Q8NBI2 242 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 OR4Q3Q8NH05 313 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 OR4K13Q8NH42 304 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 ELP4Q96EB1 424 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 GAS2L1Q99501 681 aaPredicted RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 RGCCQ9H4X1 137 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 DMRT3Q9NQL9 472 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 FADS1O60427 444 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SOX30O94993 753 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 KLF8O95600 359 aaPredicted RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 TSPAN12O95859 305 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 AGTR1P30556 359 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 PTH2RP49190 550 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SSTP61278 116 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SFT2D1Q8WV19 159 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 APH1BQ8WW43 257 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 WDFY2Q96P53 400 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 LINC00587B1AMM8 73 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 HMGN2P05204 90 aaKnown RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 SNRNP70P08621 437 aaKnown RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 CTSAP10619 480 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 DYRK1AQ13627 763 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 CSNK1A1LQ8N752 337 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 OR52E2Q8NGJ4 325 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 OR5D16Q8NGK9 328 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 ZNF480Q8WV37 535 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SPRYD4Q8WW59 207 aaPredicted RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 HIST1H2AAQ96QV6 131 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 SDHCQ99643 169 aaPredicted RBP15.03■□□□□ -0
NPHP3-201ENST00000337331 SLC6A16Q9GZN6 736 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 IL20Q9NYY1 176 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 PRODH2Q9UF12 536 aa15.03■□□□□ -0
NPHP3-201ENST00000337331 CSNK1G3Q9Y6M4 447 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms