RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 BACE2Q9Y5Z0 518 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 RHPN2P1A8MT19 583 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 TSPAN12O95859 305 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 MAPK3P27361 379 aaPredicted RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 PPM1AP35813 382 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 SLC6A11P48066 632 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 CCR9P51686 369 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 EIF2B1Q14232 305 aaKnown RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 AKR1C8PQ5T2L2 129 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 TEX19Q8NA77 164 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 SUSD6Q92537 303 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 LMLNQ96KR4 655 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 WDFY2Q96P53 400 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 CNN2Q99439 309 aaKnown RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 ABRACLQ9P1F3 81 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 V9GY05 133 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 RP1P56715 2156 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 C6P13671 934 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 CCKBRP32239 447 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 SGSHP51688 502 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 TNK1Q13470 666 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 ENPP7Q6UWV6 458 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 TRILQ7L0X0 811 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
COL2A1-201ENST00000337299 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
COL2A1-201ENST00000337299 DCDC2BA2VCK2 349 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF705GA8MUZ8 300 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 MVDP53602 400 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 KCNC3Q14003 757 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CLINT1Q14677 625 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 NXPE4Q6UWF7 544 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 LILRB1Q8NHL6 650 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ASB11Q8WXH4 323 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 TTC9Q92623 222 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ARSGQ96EG1 525 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 PPP1R16AQ96I34 528 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 PDCD1LG2Q9BQ51 273 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 SMG9Q9H0W8 520 aaKnown RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CHRDQ9H2X0 955 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 FN3KQ9H479 309 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 C1GALT1Q9NS00 363 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 SPHK1Q9NYA1 384 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 TAS2R8Q9NYW2 309 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CPNE7Q9UBL6 633 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF878C9JN71 531 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 STC2O76061 302 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ATP1B1P05026 303 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 TPT1P13693 172 aaKnown RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF8P17098 575 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CXADRP78310 365 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 BATFQ16520 125 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 MORN1Q5T089 497 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 HLA-DQA1Q5Y7H0 255 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF425Q6IV72 752 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF322Q6U7Q0 402 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 GATSQ8NAP1 163 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 BBS1Q8NFJ9 593 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 OR10H5Q8NGA6 315 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 OR4Q3Q8NH05 313 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CXorf40BQ96DE9 158 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 DLL4Q9NR61 685 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM129A0AVI4 362 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CDHR4A6H8M9 788 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 LINC00862A6NCI5 91 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CDC40O60508 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 NME2P22392 152 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 SNRPEP62304 92 aaKnown RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 CCSMST1Q4G0I0 132 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 PAPD4Q6PIY7 484 aaKnown RBP12.38□□□□□ -0.43
COL2A1-201ENST00000337299 OR11H7Q8NGC8 314 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 FBRSQ9HAH7 460 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 DMRT3Q9NQL9 472 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 LRP5O75197 1615 aa12.38□□□□□ -0.43
COL2A1-201ENST00000337299 FRKP42685 505 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ARL4DP49703 201 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 IL13RA1P78552 427 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 RING1Q06587 406 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 RIPPLY1Q0D2K3 151 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 SLC25A35Q3KQZ1 300 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TCTN3Q6NUS6 607 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 NAA40Q86UY6 237 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 OR5M1Q8NGP8 315 aa12.37□□□□□ -0.43
COL2A1-201ENST00000337299 RERGQ96A58 199 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF629Q9UEG4 869 aaPredicted RBP12.37□□□□□ -0.43
COL2A1-201ENST00000337299 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms