RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 STUB1Q9UNE7 303 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 OR51B4Q9Y5P0 310 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 PDE7AQ13946 482 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM215Q68D42 235 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF613Q6PF04 617 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 CYHR1Q6ZMK1 362 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 KIAA1958Q8N8K9 716 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 FCAMRQ8WWV6 532 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ARL5BQ96KC2 179 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 SGPP1Q9BX95 441 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 CDCP1Q9H5V8 836 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 RLIMQ9NVW2 624 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 NOP16Q9Y3C1 178 aaKnown RBP13.97□□□□□ -0.17
C9orf47-201ENST00000334490 SMAD9O15198 467 aaKnown RBP13.97□□□□□ -0.17
C9orf47-201ENST00000334490 LCMT2O60294 686 aaKnown RBP13.97□□□□□ -0.17
C9orf47-201ENST00000334490 SLC19A2O60779 497 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 DMWDQ09019 674 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 CHRFAM7AQ494W8 412 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF584Q8IVC4 421 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 LSM14AQ8ND56 463 aaKnown RBP13.97□□□□□ -0.17
C9orf47-201ENST00000334490 NPRL2Q8WTW4 380 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ACOT12Q8WYK0 555 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ACOT13Q9NPJ3 140 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 ASB1Q9Y576 335 aa13.97□□□□□ -0.17
C9orf47-201ENST00000334490 GIPRP48546 466 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 TRMT12Q53H54 448 aaKnown RBP13.96□□□□□ -0.17
C9orf47-201ENST00000334490 PGBD2Q6P3X8 592 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 OLIG3Q7RTU3 272 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 LINC00615Q96LM1 132 aaPredicted RBP13.96□□□□□ -0.17
C9orf47-201ENST00000334490 DMRTB1Q96MA1 342 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 DDX31Q9H8H2 851 aaKnown RBP13.96□□□□□ -0.17
C9orf47-201ENST00000334490 GMPR2Q9P2T1 348 aaKnown RBP13.96□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF69Q9UC07 566 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 TMPRSS11EQ9UL52 423 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 PCDHGA6Q9Y5G7 932 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 SNX11Q9Y5W9 270 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 A0A1W2PR48 441 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 HRGP04196 525 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 UCHL1P09936 223 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
C9orf47-201ENST00000334490 WNT4P56705 351 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 DNASE1L3Q13609 305 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 KEAP1Q14145 624 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 RSU1Q15404 277 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 PGGHGQ32M88 737 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 FUNDC1Q8IVP5 155 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 OR13C2Q8NGS9 318 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 CASTOR1Q8WTX7 329 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 SLC6A5Q9Y345 797 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 LOXL2Q9Y4K0 774 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 PMF1-BGLAPU3KQ54 211 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 ATG2BQ96BY7 2078 aa13.96□□□□□ -0.17
C9orf47-201ENST00000334490 NSA2O95478 260 aaKnown RBP13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TRHRP34981 398 aaPredicted RBP13.96□□□□□ -0.18
C9orf47-201ENST00000334490 FASLGP48023 281 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 LEXMQ3ZCV2 418 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 FAM205BPQ63HN1 556 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 ZNF704Q6ZNC4 412 aaPredicted RBP13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM150AQ86TG1 271 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 THOC3Q96J01 351 aaKnown RBP13.96□□□□□ -0.18
C9orf47-201ENST00000334490 BEX2Q9BXY8 128 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 BEX1Q9HBH7 125 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 KDM4EB2RXH2 506 aaPredicted RBP13.96□□□□□ -0.18
C9orf47-201ENST00000334490 C5orf67F2Z3F1 127 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 KLRC4-KLRK1H3BQV0 150 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 FBXO45P0C2W1 286 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 GTF2F2P13984 249 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 RAB15P59190 212 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 MOGQ16653 247 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM53Q6P2H8 277 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM92Q6UXU6 159 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM151AQ8N4L1 468 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 MRGPRX3Q96LB0 322 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 TEX37Q96LM6 180 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 LRRC61Q9BV99 259 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 THSD1Q9NS62 852 aa13.96□□□□□ -0.18
C9orf47-201ENST00000334490 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 RAB3BP20337 219 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 NOVA1P51513 510 aaKnown RBP13.95□□□□□ -0.18
C9orf47-201ENST00000334490 AP2S1P53680 142 aaPredicted RBP13.95□□□□□ -0.18
C9orf47-201ENST00000334490 MELKQ14680 651 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 SLC6A19Q695T7 634 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 ANKRD60Q9BZ19 345 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 POLHQ9Y253 713 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 TRBV4-1A0A0J9YWV2 114 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 TEX46H3BTG2 121 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 PLOD2O00469 737 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 TMPRSS11DO60235 418 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 SCGB1D2O95969 90 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 LCKP06239 509 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 CHRM4P08173 479 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 TPTEP56180 551 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 CADM4Q8NFZ8 388 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 OR2A1Q8NGT9 310 aa13.95□□□□□ -0.18
C9orf47-201ENST00000334490 MAELQ96JY0 434 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms