RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CNIH4Q9P003 139 aa14.99□□□□□ -0.01
SHOX-201ENST00000334060 TESMINQ9Y4I5 508 aa14.99□□□□□ -0.01
SHOX-201ENST00000334060 U3KQV3 271 aa14.99□□□□□ -0.01
SHOX-201ENST00000334060 CFAP46Q8IYW2 2715 aa14.99□□□□□ -0.01
SHOX-201ENST00000334060 ZNF407Q9C0G0 2248 aa14.99□□□□□ -0.01
SHOX-201ENST00000334060 SYT5O00445 386 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 ANPEPP15144 967 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 FOXF1Q12946 379 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 MED21Q13503 144 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 QPRTQ15274 297 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 SLC30A6Q6NXT4 461 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TMEM81Q6P7N7 255 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 NKAIN4Q8IVV8 208 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 ZADH2Q8N4Q0 377 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TMEM251Q8N6I4 163 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 ADAMTS16Q8TE57 1224 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 SECISBP2Q96T21 854 aaKnown RBP14.98□□□□□ -0.01
SHOX-201ENST00000334060 LAT2Q9GZY6 243 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 UBQLN3Q9H347 655 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 MED17Q9NVC6 651 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TBCCD1Q9NVR7 557 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 BAG5Q9UL15 447 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 SLC35A3Q9Y2D2 325 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 SPTA1P02549 2419 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 H0YC42 278 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 SHC1P29353 583 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 LCN1P31025 176 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 MAGEA2P43356 314 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 P2RX1P51575 399 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TPD52P55327 224 aaPredicted RBP14.98□□□□□ -0.01
SHOX-201ENST00000334060 C17orf67Q0P5P2 114 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 OR1Q1Q15612 314 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TBPL2Q6SJ96 375 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 GRAMD2AQ8IUY3 354 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 GPALPP1Q8IXQ4 340 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 OR1J4Q8NGS1 313 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 C9orf43Q8TAL5 461 aaPredicted RBP14.98□□□□□ -0.01
SHOX-201ENST00000334060 GEMIN6Q8WXD5 167 aaKnown RBP14.98□□□□□ -0.01
SHOX-201ENST00000334060 C5orf34Q96MH7 638 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 PKP2Q99959 881 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 TMEM185BQ9H7F4 350 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 ZNF703Q9H7S9 590 aaPredicted RBP14.98□□□□□ -0.01
SHOX-201ENST00000334060 IL1RAPQ9NPH3 570 aa14.98□□□□□ -0.01
SHOX-201ENST00000334060 A0A1B0GWA3 101 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 ZIC3O60481 467 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 PFDN1O60925 122 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 IFNA14P01570 189 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 CD46P15529 392 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 CDH12P55289 794 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 PSPHP78330 225 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 HSF1Q00613 529 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 SNTA1Q13424 505 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 ZNF169Q14929 603 aaPredicted RBP14.97□□□□□ -0.01
SHOX-201ENST00000334060 WIPI1Q5MNZ9 446 aaPredicted RBP14.97□□□□□ -0.01
SHOX-201ENST00000334060 PLXDC2Q6UX71 529 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 OR5W2Q8NH69 310 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 TMEM41AQ96HV5 264 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 ZNF300Q96RE9 604 aaPredicted RBP14.97□□□□□ -0.01
SHOX-201ENST00000334060 FAM173AQ9BQD7 235 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 Q9H521 79 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 NTN4Q9HB63 628 aa14.97□□□□□ -0.01
SHOX-201ENST00000334060 RALYQ9UKM9 306 aaKnown RBP14.97□□□□□ -0.01
SHOX-201ENST00000334060 IGLV3-32A0A0A0MS00 114 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PIP5K1CO60331 668 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 GLSO94925 669 aaPredicted RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 IFNW1P05000 195 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 FABP3P05413 133 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PSMA4P25789 261 aaKnown RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 TOMM20Q15388 145 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SEC23BQ15437 767 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PLPPR5Q32ZL2 321 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 C1QL3Q5VWW1 255 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 B3GNT6Q6ZMB0 384 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 DND1Q8IYX4 353 aaKnown RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 OR4K17Q8NGC6 315 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 C3orf49Q96BT1 292 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 C1GALT1C1Q96EU7 318 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ZNF597Q96LX8 424 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 TRIM15Q9C019 465 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 DEFB127Q9H1M4 99 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SLC6A15Q9H2J7 730 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 S100A14Q9HCY8 104 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ZFP64Q9NPA5 681 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SLC7A7Q9UM01 511 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 B3GNT3Q9Y2A9 372 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SLC6A5Q9Y345 797 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 AP4S1Q9Y587 144 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ENPP4Q9Y6X5 453 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 TRAV17A0A0B4J275 112 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 TRBV4-1A0A0J9YWV2 114 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 ZC3H12DA2A288 527 aaKnown RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 EIF4E1BA6NMX2 242 aaKnown RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 H3BNH8 94 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 RAP2AP10114 183 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PEPDP12955 493 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 PRKCAP17252 672 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 SLC7A1P30825 629 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 CHRNB3Q05901 458 aa14.96□□□□□ -0.01
SHOX-201ENST00000334060 FAM98BQ52LJ0 330 aaKnown RBP14.96□□□□□ -0.01
SHOX-201ENST00000334060 DCST1Q5T197 706 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms