RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC36A2Q495M3 483 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 TP53I3Q53FA7 332 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 SDE2Q6IQ49 451 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 FBXO42Q6P3S6 717 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 AMIGO1Q86WK6 493 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 GID4Q8IVV7 300 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 OR4K14Q8NGD5 310 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 OR5T3Q8NGG3 340 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 BRIX1Q8TDN6 353 aaKnown RBP11.4□□□□□ -0.58
VPS33B-201ENST00000333371 GCDHQ92947 438 aaPredicted RBP11.4□□□□□ -0.58
VPS33B-201ENST00000333371 BPIFA2Q96DR5 249 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 PTCHD1Q96NR3 888 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 TIMM29Q9BSF4 260 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 MKRN2Q9H000 416 aaKnown RBP11.4□□□□□ -0.58
VPS33B-201ENST00000333371 CDCP1Q9H5V8 836 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 CACNG2Q9Y698 323 aa11.4□□□□□ -0.58
VPS33B-201ENST00000333371 GXYLT2A0PJZ3 443 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 POM121BA6NF01 834 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 DUXAA6NLW8 204 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 IMPA2O14732 288 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 FZD7O75084 574 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 NDUFS1P28331 727 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TMEM44Q2T9K0 475 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 PAQR7Q86WK9 346 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SRFBP1Q8NEF9 429 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 OR8H1Q8NGG4 311 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 NR4A3Q92570 626 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GHSRQ92847 366 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 PGLYRP3Q96LB9 341 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 UBL7Q96S82 380 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 MED28Q9H204 178 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 IL21RQ9HBE5 538 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SLCO1C1Q9NYB5 712 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 MRPL15Q9P015 296 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GPR89AB7ZAQ6 455 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TRIM3O75382 744 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SOX30O94993 753 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SBK2P0C263 348 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GPR89BP0CG08 455 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GAAP10253 952 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 CFL1P23528 166 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GIFP27352 417 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 MAGEB1P43366 347 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 OR3A3P47888 321 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SRP54P61011 504 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ENPP2Q13822 863 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ACSM3Q53FZ2 586 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 DCST2Q5T1A1 773 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 RFPL4BQ6ZWI9 263 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ASPGQ86U10 573 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 RANBP3LQ86VV4 465 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 LNX2Q8N448 690 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 OR6C4Q8NGE1 309 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ACOT12Q8WYK0 555 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SMPDL3BQ92485 455 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 NDC1Q9BTX1 674 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 RAB11FIP5Q9BXF6 653 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 FN3KQ9H479 309 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SLC17A4Q9Y2C5 497 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 LRRN3E7EW58 273 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 MT-ND5P03915 603 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 CT62P0C5K7 136 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ATF1P18846 271 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 NPR2P20594 1047 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ACSL1P33121 698 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TNFRSF4P43489 277 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 DUSP8Q13202 625 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 RAB30Q15771 203 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GXYLT1Q4G148 440 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 FAAH2Q6GMR7 532 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 OR10G6Q8NH81 332 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 GAL3ST3Q96A11 431 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ZMYND19Q96E35 227 aaPredicted RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 AHCYL2Q96HN2 611 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TNFRSF13CQ96RJ3 184 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 JAM3Q9BX67 310 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 C1QTNF7Q9BXJ2 289 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 SLC17A9Q9BYT1 436 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 ERVMER34-1Q9H9K5 563 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 CACYBPQ9HB71 228 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 CMC2Q9NRP2 79 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 LYARQ9NX58 379 aaKnown RBP11.39□□□□□ -0.59
VPS33B-201ENST00000333371 MGAT4AQ9UM21 535 aa11.39□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3KA0A087X1G2 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3FA6NER0 549 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 PRR19A6NJB7 356 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 K7EQS6 105 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 PLPP2O43688 288 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 FGF17O60258 216 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 MT-ND4P03905 459 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms