RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ZNF440Q8IYI8 595 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 TCTE3Q8IZS6 198 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 OR13C2Q8NGS9 318 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 SLC37A2Q8TED4 501 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 PHYHIPQ92561 330 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 CNOT9Q92600 299 aaKnown RBP9.92□□□□□ -0.82
CCDC172-201ENST00000333254 SENP5Q96HI0 755 aaPredicted RBP9.92□□□□□ -0.82
CCDC172-201ENST00000333254 VSTM2LQ96N03 204 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 GDF15Q99988 308 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 IFT27Q9BW83 186 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 SLC19A3Q9BZV2 496 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 ISG20L2Q9H9L3 353 aaKnown RBP9.92□□□□□ -0.82
CCDC172-201ENST00000333254 UCK1Q9HA47 277 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 FOLH1BQ9HBA9 442 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 FLRT3Q9NZU0 649 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 MRPS33Q9Y291 106 aaKnown RBP9.92□□□□□ -0.82
CCDC172-201ENST00000333254 PIAS3Q9Y6X2 628 aa9.92□□□□□ -0.82
CCDC172-201ENST00000333254 TRAV1-2A0A0B4J238 106 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 SPTY2D1-AS1A0A0U1RR47 76 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CD8B2A6NJW9 211 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 FAM183AA6NL82 134 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CENPXA8MT69 81 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 OGG1O15527 345 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 LRRTM2O43300 516 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 LYRM1O43325 122 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 PPM1BO75688 479 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 IGHV4-34P06331 123 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 SAGP10523 405 aaPredicted RBP9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CD8BP10966 210 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 RNH1P13489 461 aaKnown RBP9.91□□□□□ -0.82
CCDC172-201ENST00000333254 PVRP15151 417 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 EMDP50402 254 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 BLKP51451 505 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 NRG3P56975 720 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 BTG1P62324 171 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ACTA2P62736 377 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ACTG2P63267 376 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ID2Q02363 134 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 EIF2B5Q13144 721 aaKnown RBP9.91□□□□□ -0.82
CCDC172-201ENST00000333254 IL10RAQ13651 578 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 TBRG1Q3YBR2 411 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 SLC35D3Q5M8T2 416 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 KIAA0895LQ68EN5 471 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM92Q6UXU6 159 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 OAFQ86UD1 273 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 C11orf74Q86VG3 221 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 SLC22A18ASQ8N1D0 253 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 SLC44A3Q8N4M1 653 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 OR13H1Q8NG92 308 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 OR52R1Q8NGF1 315 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 OR5T3Q8NGG3 340 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 MRPL48Q96GC5 212 aaKnown RBP9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CMTM3Q96MX0 182 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF285Q96NJ3 590 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CCDC3Q9BQI4 270 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 PELOQ9BRX2 385 aaKnown RBP9.91□□□□□ -0.82
CCDC172-201ENST00000333254 MARVELD1Q9BSK0 173 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 G6PC3Q9BUM1 346 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 HCAR1Q9BXC0 346 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ENKD1Q9H0I2 346 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ZCCHC4Q9H5U6 513 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ERVMER34-1Q9H9K5 563 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 MCCC2Q9HCC0 563 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 CHRNA9Q9UGM1 479 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
CCDC172-201ENST00000333254 TRBV23OR9-2A0A075B6M9 112 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.9□□□□□ -0.82
CCDC172-201ENST00000333254 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.9□□□□□ -0.82
CCDC172-201ENST00000333254 ARPC3O15145 178 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF749O43361 778 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 FOXS1O43638 330 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 OR10H2O60403 315 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 PRAMEF2O60811 474 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 CTNSO60931 367 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 NDUFB2O95178 105 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 OR2T7P0C7T2 308 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 IL9P15248 144 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 NPR2P20594 1047 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 THBS2P35442 1172 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 NR4A2P43354 598 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 ATP12AP54707 1039 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 CAV3P56539 151 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 VSX2P58304 361 aaPredicted RBP9.9□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF85Q03923 595 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 HSF2Q03933 536 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 LGALS3BPQ08380 585 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 IL18Q14116 193 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 FAM53BQ14153 422 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC172-201ENST00000333254 BAIAP2L2Q6UXY1 529 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 MED25Q71SY5 747 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 C19orf47Q8N9M1 422 aaKnown RBP9.9□□□□□ -0.82
CCDC172-201ENST00000333254 OR10H4Q8NGA5 316 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 OR6C4Q8NGE1 309 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 OR2T27Q8NH04 317 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 RPS4Y2Q8TD47 263 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 CREB3L1Q96BA8 519 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 RNF170Q96K19 258 aa9.9□□□□□ -0.82
CCDC172-201ENST00000333254 PGLYRP3Q96LB9 341 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms