RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NDUFAF6Q330K2 333 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 CEP85LQ5SZL2 805 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 ATAD3BQ5T9A4 648 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 ANKRD34AQ69YU3 496 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 C16orf62Q7Z3J2 963 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 P3H2Q8IVL5 708 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 TUSC5Q8IXB3 177 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 TMCO5AQ8N6Q1 288 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 CCDC115Q96NT0 180 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 PSD2Q9BQI7 771 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 THUMPD3Q9BV44 507 aaKnown RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 NUF2Q9BZD4 464 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 UBTD1Q9HAC8 227 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 ACER3Q9NUN7 267 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 ING1Q9UK53 422 aaPredicted RBP12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 MKLN1Q9UL63 735 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 WDR45Q9Y484 360 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 USF3Q68DE3 2245 aa12.08□□□□□ -0.48
GTF3C6-201ENST00000329970 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ZNF724A8MTY0 619 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 FAM171A2A8MVW0 826 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 CYTIPO60759 359 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 CNOT4O95628 575 aaKnown RBP12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 INHBBP09529 407 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 KHKP50053 298 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SLC18A1P54219 525 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SESN3P58005 492 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 BST1Q10588 318 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 FUT5Q11128 374 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 P2RY6Q15077 328 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 TIGD2Q4W5G0 525 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SPANXN4Q5MJ08 99 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 Q5PR19 223 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SFRP5Q5T4F7 317 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ZNF704Q6ZNC4 412 aaPredicted RBP12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SSX8Q7RTT4 187 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 NUFIP2Q7Z417 695 aaKnown RBP12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SPATA19Q7Z5L4 167 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 CLEC4FQ8N1N0 589 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ZNF619Q8N2I2 560 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 PMM1Q92871 262 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 ROPN1LQ96C74 230 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 PPP1R36Q96LQ0 422 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 GSX1Q9H4S2 264 aaPredicted RBP12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 SERINC1Q9NRX5 453 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 AIG1Q9NVV5 245 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 PRDM4Q9UKN5 801 aa12.07□□□□□ -0.48
GTF3C6-201ENST00000329970 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 SDHDO14521 159 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 SMAD9O15198 467 aaKnown RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 DNPH1O43598 174 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 DIAPH2O60879 1101 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 H6PDO95479 791 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ALDOCP09972 364 aaKnown RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 OR12D1P0DN82 309 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ENPP1P22413 925 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 S100A3P33764 101 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 APOBEC1P41238 236 aaKnown RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 MAGEA8P43361 318 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 OR3A2P47893 321 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ANXA11P50995 505 aaKnown RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 CCR4P51679 360 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 CSNK2A1P68400 391 aaPredicted RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ITGADQ13349 1161 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 PDK3Q15120 406 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 MAPK14Q16539 360 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 FAM174BQ3ZCQ3 159 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 SYT14P1Q58G82 188 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ABLIM2Q6H8Q1 611 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 TMPPEQ6ZT21 453 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 Q6ZT83 130 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 PLEKHM3Q6ZWE6 761 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 ANKRD46Q86W74 232 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 CMIPQ8IY22 773 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 TRIML2Q8N7C3 387 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 RAB3IL1Q8TBN0 382 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 XAGE5Q8WWM1 108 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 HSD17B8Q92506 261 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 PLPPR2Q96GM1 343 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 COX4I2Q96KJ9 171 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 CCDC106Q9BWC9 280 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 KCNK9Q9NPC2 374 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 NGBQ9NPG2 151 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 PNPOQ9NVS9 261 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 THAP1Q9NVV9 213 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 MARCOQ9UEW3 520 aaPredicted RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 LIPT1Q9Y234 373 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 SPIN1Q9Y657 262 aaPredicted RBP12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
GTF3C6-201ENST00000329970 IGKV3D-15A0A087WSY6 115 aa12.05□□□□□ -0.48
GTF3C6-201ENST00000329970 A0A1W2PNR3 127 aa12.05□□□□□ -0.48
GTF3C6-201ENST00000329970 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms