RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 C14orf79Q96F83 325 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 TMEM19Q96HH6 336 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 REXO5Q96IC2 774 aaKnown RBP13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 SERINC1Q9NRX5 453 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 ACER3Q9NUN7 267 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 MRGBPQ9NV56 204 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 SLC25A37Q9NYZ2 338 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 SLAMF8Q9P0V8 285 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 NDUFAF1Q9Y375 327 aa13.16□□□□□ -0.3
TUBA3D-201ENST00000321253 ABCA12Q86UK0 2595 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 A0A0G2JPF8 293 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 EVPLLA8MZ36 301 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 HNRNPCL2B2RXH8 293 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 HNRNPCL3B7ZW38 293 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 C5orf58C9J3I9 102 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 ETV2O00321 342 aaPredicted RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 EFNA2O43921 213 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 HNRNPCL1O60812 293 aaKnown RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 TNFSF13O75888 250 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 SMNDC1O75940 238 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 AQP8O94778 261 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 HNRNPCL4P0DMR1 293 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 UQCRBP14927 111 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 SHC1P29353 583 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 DLX5P56178 289 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 SIRPAP78324 504 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 MAPK11Q15759 364 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 LIN52Q52LA3 116 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 MRPL2Q5T653 305 aaKnown RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 MSRB3Q8IXL7 192 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 CNOT9Q92600 299 aaKnown RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 OSTF1Q92882 214 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 ZNF524Q96C55 264 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 ZNF559Q9BR84 538 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 RBM24Q9BX46 236 aaKnown RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 CCDC134Q9H6E4 229 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 A4GALTQ9NPC4 353 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 DNAJB12Q9NXW2 375 aaKnown RBP13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 JKAMPQ9P055 326 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 VAPAQ9P0L0 249 aa13.15□□□□□ -0.3
TUBA3D-201ENST00000321253 DSPPQ9NZW4 1301 aa13.15□□□□□ -0.31
TUBA3D-201ENST00000321253 NUDT7P0C024 238 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 BMP2P12643 396 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 MDH1P40925 334 aaKnown RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 KIR2DL3P43628 341 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 TLE4Q04727 773 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 SF3A3Q12874 501 aaKnown RBP eCLIP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 LARS2Q15031 903 aaKnown RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 GCNT6Q5T4J0 391 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 PLEKHM3Q6ZWE6 761 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 ZNF440Q8IYI8 595 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 TSPEARQ8WU66 669 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 MAL2Q969L2 176 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 CPNE4Q96A23 557 aaPredicted RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 ARMC7Q9H6L4 198 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 ZNF232Q9UNY5 417 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 EMC9Q9Y3B6 208 aa13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 SPIN1Q9Y657 262 aaPredicted RBP13.14□□□□□ -0.31
TUBA3D-201ENST00000321253 TRBV5-3A0A0A0MS03 114 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 CFAP73A6NFT4 308 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 MSTNO14793 375 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 THBS1P07996 1170 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 CD1EP15812 388 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 CPOXP36551 454 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 APOBEC1P41238 236 aaKnown RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 KIR2DL2P43627 348 aaPredicted RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 IDH2P48735 452 aaKnown RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 CTBP2P56545 445 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 SNTB1Q13884 538 aaKnown RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 ZSWIM7Q19AV6 140 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 PRAMEF8Q5VWM4 474 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 PRAMEF7Q5VXH5 474 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GTF2IRD2BQ6EKJ0 949 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 VWA1Q6PCB0 445 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 ZNF836Q6ZNA1 936 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 FAM214BQ7L5A3 538 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GRINAQ7Z429 371 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GTF2IRD2Q86UP8 949 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 VRK2Q86Y07 508 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 SLC25A43Q8WUT9 341 aaPredicted RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 STARD4Q96DR4 205 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GLRX2Q9NS18 164 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 ZNF443Q9Y2A4 671 aaPredicted RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 IFT52Q9Y366 437 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 GMEB1Q9Y692 573 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 ANKHD1Q8IWZ3 2542 aaKnown RBP13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 CDHR4A6H8M9 788 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 A8MXE2 369 aa13.13□□□□□ -0.31
TUBA3D-201ENST00000321253 AP3D1O14617 1153 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms