RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ACTG1P63261 375 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DEFA5Q01523 94 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC3A1Q07837 685 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM69Q5SWH9 247 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OR5M10Q6IEU7 315 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 HAGHLQ6PII5 290 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TSSK4Q6SA08 328 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 B3GLCTQ6Y288 498 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 GAREM2Q75VX8 874 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OR5D16Q8NGK9 328 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OR10K1Q8NGX5 313 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MARC2Q969Z3 335 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLCO5A1Q9H2Y9 848 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SAV1Q9H4B6 383 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MBD1Q9UIS9 605 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PCDHGA9Q9Y5G4 932 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ANKRD20A5PA0PJZ0 165 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SULT1C2O00338 296 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SNAPINO95295 136 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 VNN2O95498 520 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 RLN1P04808 185 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CHRM4P08173 479 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MELTFP08582 738 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TFPIP10646 304 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NOS3P29474 1203 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PRKAG1P54619 331 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 IER5LQ5T953 404 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DLK2Q6UY11 383 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TMPRSS11FQ6ZWK6 438 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM99Q8N816 258 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PCNPQ8WW12 178 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SLC38A1Q9H2H9 487 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 BEX1Q9HBH7 125 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CFAP97Q9P2B7 532 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ANK1P16157 1881 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 LRRC72A6NJI9 287 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 F8W036 122 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 G3V3Q6 166 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 POP7O75817 140 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PMS2P2O95744 297 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CYBAP13498 195 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 AHRP35869 848 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 GDI2P50395 445 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ETFDHQ16134 617 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 EIF5AL1Q6IS14 154 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 IL20RBQ6UXL0 311 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 GDF7Q7Z4P5 450 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 HSD11B1LQ7Z5J1 315 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DTX3Q8N9I9 347 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 OR2AK2Q8NG84 335 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 FANK1Q8TC84 345 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 LGALS14Q8TCE9 139 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TFGQ92734 400 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NKX6-2Q9C056 277 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 GLIPR2Q9H4G4 154 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM138Q9NPI0 162 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MARCH5Q9NX47 278 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 J3QLW9 94 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DNASE2O00115 360 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ARPC3O15145 178 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 NUPL2O15504 423 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 GREM1O60565 184 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 DBIP07108 87 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 TACSTD2P09758 323 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF19P17023 458 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CXCL2P19875 107 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 PVALBP20472 110 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CD70P32970 193 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 RAB5BP61020 215 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MLLT1Q03111 559 aaPredicted RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ISXQ2M1V0 245 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 APOOLQ6UXV4 268 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 Q6ZTK2 550 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 MOB3CQ70IA8 216 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF740Q8NDX6 193 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 WFDC5Q8TCV5 224 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 CNN2Q99439 309 aaKnown RBP4.44□□□□□ -1.7
PTPN13-201ENST00000316707 ACTRT3Q9BYD9 372 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SEMA4CQ9C0C4 833 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 WDR45Q9Y484 360 aa4.44□□□□□ -1.7
PTPN13-201ENST00000316707 RALGAPA2Q2PPJ7 1873 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SOCS6O14544 535 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ADAM11O75078 769 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ADAMTS4O75173 837 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 HRGP04196 525 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GP1BAP07359 652 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 THBS1P07996 1170 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RAB13P51153 203 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SLC25A35Q3KQZ1 300 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ELP2Q6IA86 826 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 C3orf33Q6P1S2 294 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RSPO2Q6UXX9 243 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 ARL14EPQ8N8R7 260 aaPredicted RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR1J4Q8NGS1 313 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 SMPDL3BQ92485 455 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 MIB2Q96AX9 1013 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms