RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 IL12RB2Q99665 862 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 TDRD1Q9BXT4 1180 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 WWP1Q9H0M0 922 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ACOXLQ9NUZ1 547 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 FGFR1OP2Q9NVK5 253 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 RBM22Q9NW64 420 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 UTP6Q9NYH9 597 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 DCDC2Q9UHG0 476 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 DIMT1Q9UNQ2 313 aaKnown RBP3.47□□□□□ -1.85
SMCO3-201ENST00000316048 ARL2BPQ9Y2Y0 163 aa3.47□□□□□ -1.85
SMCO3-201ENST00000316048 IGLV3-10A0A075B6K4 115 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 FAM172BPA6NC97 362 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PMS2P5A8MQ11 134 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 A8MU76 341 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 F5H5T6 163 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 H0YHG0 523 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SLC1A7O00341 560 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PIAS1O75925 651 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TXNDC12O95881 172 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PRSS1P07477 247 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 HMBSP08397 361 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CCDC159P0C7I6 412 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ZDHHC11BP0C7U3 371 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 GNSP15586 552 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OR1E1P30953 314 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 FOXN2P32314 431 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 MAGEA9P43362 315 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 LIMK2P53671 638 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KCNJ10P78508 379 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 BTG3Q14201 252 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 EXOSC7Q15024 291 aaKnown RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SLC1A5Q15758 541 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PARP15Q460N3 678 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 RABGAP1LQ5R372 815 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 FAM182AQ5T1J6 154 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 DCAF12Q5T6F0 453 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PLPP4Q5VZY2 271 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 LIPJQ5W064 366 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 FBXL22Q6P050 247 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SYVN1Q86TM6 617 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CACUL1Q86Y37 369 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PARP8Q8N3A8 854 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 MARVELD2Q8N4S9 558 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 MINDY2Q8NBR6 621 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OR5AP2Q8NGF4 316 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ARNTL2Q8WYA1 636 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF75CPQ92670 426 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CERS2Q96G23 380 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SERAC1Q96JX3 654 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 RPRD1AQ96P16 312 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 S1PR3Q99500 378 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KLF6Q99612 283 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TBL1YQ9BQ87 522 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CCM2Q9BSQ5 444 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SLC25A51Q9H1U9 297 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 C11orf49Q9H6J7 331 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CWH43Q9H720 699 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ACTR8Q9H981 624 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 UXTQ9UBK9 157 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KCNG2Q9UJ96 466 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TBX21Q9UL17 535 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PLLPQ9Y342 182 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PYGO1Q9Y3Y4 419 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 NLRC5Q86WI3 1866 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 COL4A4P53420 1690 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 IGHV4-4A0A075B6R2 117 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PRRG1O14668 218 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 BIRC5O15392 142 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 EDF1O60869 148 aaKnown RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KHDRBS3O75525 346 aaKnown RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 DCTN3O75935 186 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 AP2A2O94973 939 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OR6A2O95222 327 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SYNGR4O95473 234 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TIMP1P01033 207 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 IGLV3-27P01718 113 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 C1QAP02745 245 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SFTPBP07988 381 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CT45A8P0DMV1 189 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CT45A9P0DMV2 189 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TROVE2P10155 538 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ATF6P18850 670 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 AADACP22760 399 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 GLRA1P23415 457 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 DNAJB1P25685 340 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PKLRP30613 574 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PRDX2P32119 198 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CCKARP32238 428 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 FEN1P39748 380 aaKnown RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OPRL1P41146 370 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CDH4P55283 916 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TRA2BP62995 288 aaKnown RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CRADDP78560 199 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SGCGQ13326 291 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PLD1Q13393 1074 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CT45A2Q5DJT8 189 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PDPK2PQ6A1A2 396 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 Q6ZVQ6 151 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 NLRP9Q7RTR0 991 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms