RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ZNF275Q9NSD4 429 aaPredicted RBP5.59□□□□□ -1.51
SEC22A-201ENST00000309934 CDV3Q9UKY7 258 aaKnown RBP5.59□□□□□ -1.51
SEC22A-201ENST00000309934 A0A0G2JN53 185 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 XKRYO14609 159 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 SLC22A1O15245 554 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 NDUFS6O75380 124 aaKnown RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 ZFAND5O76080 213 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 GBAP04062 536 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 TFAP2AP05549 437 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 MSX2P35548 267 aaPredicted RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 RPL4P36578 427 aaKnown RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 HLCSP50747 726 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 EMP2P54851 167 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 SUMO3P55854 103 aaPredicted RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 PCBP4P57723 403 aaKnown RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 PRPS1P60891 318 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 SNAPC1Q16533 368 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 PROX2Q3B8N5 592 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 DCAF12Q5T6F0 453 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 OPN5Q6U736 354 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 SPRED2Q7Z698 418 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 OAFQ86UD1 273 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 TMEM102Q8N9M5 508 aaPredicted RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 OR6S1Q8NH40 331 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 OR51Q1Q8NH59 317 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 CPNE2Q96FN4 548 aaPredicted RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 C5orf34Q96MH7 638 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 OR2A5Q96R48 311 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 CRB3Q9BUF7 120 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF768Q9H5H4 540 aaKnown RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 SPACA1Q9HBV2 294 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 INPP5EQ9NRR6 644 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 CNOT2Q9NZN8 540 aaKnown RBP5.59□□□□□ -1.52
SEC22A-201ENST00000309934 B3GNT3Q9Y2A9 372 aa5.59□□□□□ -1.52
SEC22A-201ENST00000309934 A0A1W2PPV9 198 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ARHGAP33O14559 1287 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SLC16A6O15403 523 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 RRP8O43159 456 aaKnown RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PCDHGA12O60330 932 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 RDH16O75452 317 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 LY86O95711 162 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 HK1P19367 917 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 MC3RP41968 323 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 XCR1P46094 333 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 CDC34P49427 236 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 CRISP1P54107 249 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 DUSP8Q13202 625 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF542PQ5EBM4 170 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TRIM61Q5EBN2 209 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 C9orf152Q5JTZ5 239 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SLC27A4Q6P1M0 643 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 USP51Q70EK9 711 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SLC34A3Q8N130 599 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 OR9A2Q8NGT5 310 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 RHBDD1Q8TEB9 315 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 C3orf49Q96BT1 292 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TM4SF19Q96DZ7 209 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 C10orf90Q96M02 699 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 DEFB126Q9BYW3 111 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SLC19A3Q9BZV2 496 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PPIL3Q9H2H8 161 aaKnown RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TNFRSF12AQ9NP84 129 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TMEM138Q9NPI0 162 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 UBQLN2Q9UHD9 624 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 CBLCQ9ULV8 474 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF443Q9Y2A4 671 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PLEKHA6Q9Y2H5 1048 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 MAB21L2Q9Y586 359 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PCDHGB5Q9Y5G0 923 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TRBV5-3A0A0A0MS03 114 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 UNC119BA6NIH7 251 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 EFCAB9A8MZ26 197 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 OR2T1O43869 369 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 CSTAP01040 98 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 RPLP0P05388 317 aaKnown RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 IGFBP1P08833 259 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SAGP10523 405 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 CD22P20273 847 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ITPKBP27987 946 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PTPN6P29350 595 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF41P51814 821 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 RAE1P78406 368 aaKnown RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 SIM1P81133 766 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 NPRL3Q12980 569 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ERV3-1Q14264 604 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 HABP2Q14520 560 aaPredicted RBP5.58□□□□□ -1.52
SEC22A-201ENST00000309934 MZT2BQ6NZ67 158 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF367Q7RTV3 350 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 GPALPP1Q8IXQ4 340 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 DNAJC22Q8N4W6 341 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 DEFB119Q8N690 84 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 LINC01555Q8NAE3 123 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 AQP11Q8NBQ7 271 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ZNF740Q8NDX6 193 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 FBXO27Q8NI29 283 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 TFAP2CQ92754 450 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 MR1Q95460 341 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 ADIPOR1Q96A54 375 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 PEX11GQ96HA9 241 aa5.58□□□□□ -1.52
SEC22A-201ENST00000309934 GPR61Q9BZJ8 451 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms