RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 TMEM120BA0PK00 339 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 GOLGA8OA6NCC3 632 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 GOLGA8NF8WBI6 632 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 SDHDO14521 159 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 H6PDO95479 791 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 KITP10721 976 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 UFM1P61960 85 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 FUT5Q11128 374 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 MERTKQ12866 999 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 TSC22D1Q15714 1073 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 MAPK14Q16539 360 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 GPAT3Q53EU6 434 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 Q5PR19 223 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 OGFOD2Q6N063 350 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 KRTAP1-3Q8IUG1 177 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 ZNF563Q8TA94 476 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 TMEM234Q8WY98 164 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 ST8SIA1Q92185 356 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 NEURL3Q96EH8 262 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 TEX37Q96LM6 180 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 AIG1Q9NVV5 245 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 GPR52Q9Y2T5 361 aa17.38■□□□□ 0.37
LIME1-201ENST00000309546 MAP1AP78559 2803 aaPredicted RBP17.38■□□□□ 0.37
LIME1-201ENST00000309546 SETD2Q9BYW2 2564 aaPredicted RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 C1QCP02747 245 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 FOSL1P15407 271 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 PGCP20142 388 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 PSMB1P20618 241 aaKnown RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 IL32P24001 234 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 WDR4P57081 412 aaKnown RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 SESN3P58005 492 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 RAC3P60763 192 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 SHEQ5VZ18 495 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 FRRS1Q6ZNA5 592 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 ZNF704Q6ZNC4 412 aaPredicted RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 C20orf204Q6ZNR8 217 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 RNF130Q86XS8 419 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 ZNF619Q8N2I2 560 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 SLC43A2Q8N370 569 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 S100PBPQ96BU1 408 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 PERPQ96FX8 193 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 PLPPR2Q96GM1 343 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 CCDC115Q96NT0 180 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 PANX1Q96RD7 426 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 WDR55Q9H6Y2 383 aaPredicted RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 POLE3Q9NRF9 147 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 SERINC1Q9NRX5 453 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 BTNL2Q9UIR0 455 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 SLC35A3Q9Y2D2 325 aa17.37■□□□□ 0.37
LIME1-201ENST00000309546 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
LIME1-201ENST00000309546 PRR14LQ5THK1 2151 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 ETV2O00321 342 aaPredicted RBP17.36■□□□□ 0.37
LIME1-201ENST00000309546 ARHGEF9O43307 516 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 KLF4O43474 513 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 BCAS1O75363 584 aaPredicted RBP17.36■□□□□ 0.37
LIME1-201ENST00000309546 YES1P07947 543 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 EPHA3P29320 983 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 RYKP34925 604 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 PGM1P36871 562 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 NR1H2P55055 460 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 NXNQ6DKJ4 435 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 PLEKHM3Q6ZWE6 761 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 SPATA19Q7Z5L4 167 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 STEAP2Q8NFT2 490 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 ZBTB18Q99592 522 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 PIP5K1AQ99755 562 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 TACO1Q9BSH4 297 aaKnown RBP17.36■□□□□ 0.37
LIME1-201ENST00000309546 INPP5KQ9BT40 448 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 GP6Q9HCN6 339 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 THAP1Q9NVV9 213 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 KLHL9Q9P2J3 617 aa17.36■□□□□ 0.37
LIME1-201ENST00000309546 ARID1AO14497 2285 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 TRPC5OSA6NMA1 111 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 SMAD9O15198 467 aaKnown RBP17.35■□□□□ 0.37
LIME1-201ENST00000309546 GCM2O75603 506 aaPredicted RBP17.35■□□□□ 0.37
LIME1-201ENST00000309546 PLAUP00749 431 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 TFPIP10646 304 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 IL12AP29459 219 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 CDKN2CP42773 168 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 CHRNEQ04844 493 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 RASGEF1BQ0VAM2 473 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 SYT14P1Q58G82 188 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 ZNF621Q6ZSS3 439 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 GABRG1Q8N1C3 465 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 TRIML2Q8N7C3 387 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 DNAJA3Q96EY1 480 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 C18orf12Q96KH6 178 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 OR52E6Q96RD3 313 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 ZNF300Q96RE9 604 aaPredicted RBP17.35■□□□□ 0.37
LIME1-201ENST00000309546 PSD2Q9BQI7 771 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 OR10A4Q9H209 315 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 ACER3Q9NUN7 267 aa17.35■□□□□ 0.37
LIME1-201ENST00000309546 PRAMEF27A3QJZ7 478 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 CCDC154A6NI56 674 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 CLDN24A6NM45 220 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 SULT2B1O00204 365 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 HMGN4O00479 90 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 HDAC3O15379 428 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 DNAJA2O60884 412 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 SNNO75324 88 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms