RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 SOCS6O14544 535 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SRPX2O60687 465 aaPredicted RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 SDC3O75056 442 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 ADAMTS4O75173 837 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 RPS21P63220 83 aaKnown RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 FGL2Q14314 439 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 CLPPQ16740 277 aaPredicted RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 C2orf27AQ580R0 203 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 EID2Q8N6I1 236 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 C17orf113A0A1B0GUU1 675 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 WASH3PC4AMC7 463 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SLC6A9P48067 706 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SIRPAP78324 504 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 DBPQ10586 325 aaPredicted RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 HYAL2Q12891 473 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 GPR50Q13585 617 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 DHCR24Q15392 516 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 OR1Q1Q15612 314 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 LRRC69Q6ZNQ3 347 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 ZNF740Q8NDX6 193 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 OR2L8Q8NGY9 312 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 PHYHIPQ92561 330 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 C20orf85Q9H1P6 137 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 TRAV27A0A087WT01 109 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 HCRTR2O43614 444 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 GMDSO60547 372 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 ATP1B1P05026 303 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 FBXO45P0C2W1 286 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SORDQ00796 357 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 CHAF1BQ13112 559 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 OR5T3Q8NGG3 340 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 TCTEX1D2Q8WW35 142 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 DCUN1D4Q92564 292 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 WDFY2Q96P53 400 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SERINC2Q96SA4 455 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 HRASLS2Q9NWW9 162 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 YARS2Q9Y2Z4 477 aaKnown RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 TAS2R19P59542 299 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 CCINQ13939 588 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 CYHR1Q6ZMK1 362 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SLC51BQ86UW2 128 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 OR13C3Q8NGS6 347 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 PFDN5Q99471 154 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 PRRT1Q99946 306 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 MED20Q9H944 212 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 ZNF334Q9HCZ1 680 aaPredicted RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 SDHAF3Q9NRP4 125 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SIDT1Q9NXL6 827 aaKnown RBP18.05■□□□□ 0.48
USP48-201ENST00000308271 OR1A2Q9Y585 309 aa18.05■□□□□ 0.48
USP48-201ENST00000308271 SHROOM3Q8TF72 1996 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 H7C417 338 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 SULT1C2O00338 296 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 OR2T7P0C7T2 308 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 MAOAP21397 527 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 GJA5P36382 358 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 NNATQ16517 81 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 NKPD1Q17RQ9 610 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 CHRFAM7AQ494W8 412 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 OR2T27Q8NH04 317 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 TCEAL3Q969E4 200 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 GAL3ST3Q96A11 431 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 SFXN2Q96NB2 322 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 MS4A8Q9BY19 250 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 TLR9Q9NR96 1032 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 PHIPQ8WWQ0 1821 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 HRGP04196 525 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 RNH1P13489 461 aaKnown RBP18.04■□□□□ 0.48
USP48-201ENST00000308271 GLP1RP43220 463 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 LTBQ06643 244 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 MEF2DQ14814 521 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 PXYLP1Q8TE99 480 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 SCARB1Q8WTV0 552 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 ZBTB8AQ96BR9 441 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 TM4SF18Q96CE8 201 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 MSLNLQ96KJ4 702 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 PBDC1Q9BVG4 233 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 SEMA4GQ9NTN9 838 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 FAM171A2A8MVW0 826 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 RBMXL2O75526 392 aaKnown RBP18.04■□□□□ 0.48
USP48-201ENST00000308271 TNFP01375 233 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 NPPBP16860 134 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 AMY2BP19961 511 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 RGS19P49795 217 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 KRBOX4Q5JUW0 171 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 DCST2Q5T1A1 773 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 ACSM5Q6NUN0 579 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 CPNE2Q96FN4 548 aaPredicted RBP18.04■□□□□ 0.48
USP48-201ENST00000308271 KATNBL1Q9H079 304 aa18.04■□□□□ 0.48
USP48-201ENST00000308271 TAS2R31P59538 309 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 RBM45Q8IUH3 476 aaKnown RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 OR10K1Q8NGX5 313 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 OR8D2Q9GZM6 311 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 QRSL1Q9H0R6 528 aaKnown RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 SLC6A13Q9NSD5 602 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 SIRT5Q9NXA8 310 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 IGFBP1P08833 259 aaPredicted RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 S100A12P80511 92 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
USP48-201ENST00000308271 RDH10Q8IZV5 341 aa18.03■□□□□ 0.48
USP48-201ENST00000308271 APMAPQ9HDC9 416 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms