RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 FAM69BQ5VUD6 431 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PHTF2Q8N3S3 785 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC22A24Q8N4F4 322 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR7G3Q8NG95 312 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HMGCLL1Q8TB92 370 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SPRYD4Q8WW59 207 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 CITED4Q96RK1 184 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 GSTO2Q9H4Y5 243 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PNPOQ9NVS9 261 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CNIH4Q9P003 139 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 NDRG4Q9ULP0 352 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 IVDP26440 423 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MMP15P51511 669 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HNF4GQ14541 408 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MIDNQ504T8 468 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 AKR1C8PQ5T2L2 129 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CBLL1Q75N03 491 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 YIPF7Q8N8F6 280 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR5W2Q8NH69 310 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 EDARADDQ8WWZ3 215 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SGCZQ96LD1 299 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 A0A1W2PS29 197 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 GLOD5A6NK44 160 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 I3L521 148 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FLT3LGP49771 235 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC36A2Q495M3 483 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FAM74A3Q4VXF1 159 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TANGO2Q6ICL3 276 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 H3F3CQ6NXT2 135 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ADAMTSL4Q6UY14 1074 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TMEM200AQ86VY9 491 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SAMD12Q8N8I0 201 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR14C36Q8NHC7 312 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 BRIX1Q8TDN6 353 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 PPP1R13LQ8WUF5 828 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PTX4Q96A99 478 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TMEM68Q96MH6 324 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZFYVE21Q9BQ24 234 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RNF121Q9H920 327 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CBLCQ9ULV8 474 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 NID1P14543 1247 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MAKP20794 623 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CNR2P34972 360 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CCNIQ14094 377 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC30A6Q6NXT4 461 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LSMEM2Q8N112 164 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FAM71E2Q8N5Q1 922 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CSNK2A3Q8NEV1 391 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR52P1PQ8NH57 321 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ELL3Q9HB65 397 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 ARHGEF17Q96PE2 2063 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 A0A1W2PPM1 405 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HRO43593 1189 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TLX2O43763 284 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 TAC4Q86UU9 113 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 KLHDC1Q8N7A1 406 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 FRMD1Q8N878 549 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 IGSF21Q96ID5 467 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MUS81Q96NY9 551 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 PRMT8Q9NR22 394 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 A0A0G2JMZ2 1700 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LRRC37A2A6NM11 1700 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 TMEM265A0A087WTH1 108 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LOC102723532A0A0G2JNH3 316 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HPGDSO60760 199 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HOXB2P14652 356 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZNF14P17017 642 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 RPL17P18621 184 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 CD52P31358 61 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MDH2P40926 338 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZNF91Q05481 1191 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ETFRF1Q6IPR1 90 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 SIPA1Q96FS4 1042 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RPH3AQ9Y2J0 694 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 GPR55Q9Y2T6 319 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 A0A1W2PQL4 384 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 SLC35F4A4IF30 521 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ARHGAP33O14559 1287 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 HEXBP07686 556 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 IL1R2P27930 398 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 CHATP28329 748 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RNF44Q7L0R7 432 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 DCXRQ7Z4W1 244 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 LSRQ86X29 649 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR7G2Q8NG99 324 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 OR6M1Q8NGM8 313 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 NDRG1Q92597 394 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 FUNDC2Q9BWH2 189 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 BCL2L14Q9BZR8 327 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 MKRN2Q9H000 416 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 RHBGQ9H310 441 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 DKKL1Q9UK85 242 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 ZNF840PA6NDX5 716 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 EIF4E2O60573 245 aaKnown RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 PPP1R11O60927 126 aaPredicted RBP3.77□□□□□ -1.81
USH2A-201ENST00000307340 YIF1AO95070 293 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 NUDT7P0C024 238 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 GLB1P16278 677 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 RAPSNQ13702 412 aa3.77□□□□□ -1.81
USH2A-201ENST00000307340 NSUN3Q9H649 340 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms