RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ISLR2Q6UXK2 745 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 Q6ZPB1 254 aaPredicted RBP16.01■□□□□ 0.15
KRT28-201ENST00000306658 RASSF6Q6ZTQ3 369 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 OR10G3Q8NGC4 313 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 IL17BQ9UHF5 180 aa16.01■□□□□ 0.15
KRT28-201ENST00000306658 ELOA3DA6NLF2 546 aaPredicted RBP16■□□□□ 0.15
KRT28-201ENST00000306658 KLF4O43474 513 aa16■□□□□ 0.15
KRT28-201ENST00000306658 DXOO77932 396 aaKnown RBP16■□□□□ 0.15
KRT28-201ENST00000306658 GPR4P46093 362 aa16■□□□□ 0.15
KRT28-201ENST00000306658 CTBP2P56545 445 aa16■□□□□ 0.15
KRT28-201ENST00000306658 Q0VFX4 171 aa16■□□□□ 0.15
KRT28-201ENST00000306658 ATP1A4Q13733 1029 aa16■□□□□ 0.15
KRT28-201ENST00000306658 BLMHQ13867 455 aa16■□□□□ 0.15
KRT28-201ENST00000306658 MEP1AQ16819 746 aa16■□□□□ 0.15
KRT28-201ENST00000306658 ELOA3BQ3SY89 546 aa16■□□□□ 0.15
KRT28-201ENST00000306658 KCTD21Q4G0X4 260 aa16■□□□□ 0.15
KRT28-201ENST00000306658 FCRLBQ6BAA4 426 aa16■□□□□ 0.15
KRT28-201ENST00000306658 H3F3CQ6NXT2 135 aa16■□□□□ 0.15
KRT28-201ENST00000306658 JMJD6Q6NYC1 403 aaPredicted RBP16■□□□□ 0.15
KRT28-201ENST00000306658 IL20RBQ6UXL0 311 aa16■□□□□ 0.15
KRT28-201ENST00000306658 TMPRSS11FQ6ZWK6 438 aa16■□□□□ 0.15
KRT28-201ENST00000306658 TMEM156Q8N614 296 aa16■□□□□ 0.15
KRT28-201ENST00000306658 ELOA3Q8NG57 546 aa16■□□□□ 0.15
KRT28-201ENST00000306658 PFN4Q8NHR9 129 aa16■□□□□ 0.15
KRT28-201ENST00000306658 FAM81AQ8TBF8 368 aa16■□□□□ 0.15
KRT28-201ENST00000306658 ADAMTS17Q8TE56 1095 aa16■□□□□ 0.15
KRT28-201ENST00000306658 FBLIM1Q8WUP2 373 aa16■□□□□ 0.15
KRT28-201ENST00000306658 HDAC2Q92769 488 aaKnown RBP16■□□□□ 0.15
KRT28-201ENST00000306658 BPIFA2Q96DR5 249 aa16■□□□□ 0.15
KRT28-201ENST00000306658 SECISBP2Q96T21 854 aaKnown RBP16■□□□□ 0.15
KRT28-201ENST00000306658 SLC19A3Q9BZV2 496 aa16■□□□□ 0.15
KRT28-201ENST00000306658 C12orf10Q9HB07 376 aa16■□□□□ 0.15
KRT28-201ENST00000306658 HTR3EA5X5Y0 456 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 KPNA4O00629 521 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 TP53P04637 393 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 LIPCP11150 499 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 PTNP21246 168 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 ELK4P28324 431 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 SUMO3P55854 103 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 CDK5R2Q13319 367 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 SNTA1Q13424 505 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 TOP3AQ13472 1001 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 RBM48Q5RL73 367 aaKnown RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 C6orf141Q5SZD1 244 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 ATG4DQ86TL0 474 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 MEX3DQ86XN8 651 aaKnown RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 ADAM19Q9H013 955 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 ADNPQ9H2P0 1102 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 MEPEQ9NQ76 525 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 IMPAD1Q9NX62 359 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 MASP2O00187 686 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 ADAM10O14672 748 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GMFGO60234 142 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 MPZL2O60487 215 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 CDC40O60508 579 aaKnown RBP eCLIP15.99■□□□□ 0.15
KRT28-201ENST00000306658 GFRA3O60609 400 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GP1BBP13224 206 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 MSX1P28360 303 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 CASP3P42574 277 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GIPRP48546 466 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GAS1P54826 345 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 MAD2L1BPQ15013 274 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 COL28A1Q2UY09 1125 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 CTU2Q2VPK5 515 aaKnown RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 TMEM236Q5W0B7 351 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 CCDC71Q8IV32 467 aaPredicted RBP15.99■□□□□ 0.15
KRT28-201ENST00000306658 TEX47Q8TBZ9 253 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GPR119Q8TDV5 335 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 OSTF1Q92882 214 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 GALNT9Q9HCQ5 603 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 C20orf141Q9NUB4 165 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 PPP4R1LQ9P1A2 415 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 BLOC1S6Q9UL45 172 aa15.99■□□□□ 0.15
KRT28-201ENST00000306658 UNC119BA6NIH7 251 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 GNB5O14775 395 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 MAN1A2O60476 641 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 IGFBP1P08833 259 aaPredicted RBP15.98■□□□□ 0.15
KRT28-201ENST00000306658 DCAF10Q5QP82 559 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 BROXQ5VW32 411 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 SLX4IPQ5VYV7 408 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 TMEM81Q6P7N7 255 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 CASP12Q6UXS9 341 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 ENTHD1Q8IYW4 607 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 CLDN22Q8N7P3 220 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 TSPAN14Q8NG11 270 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 CNIH3Q8TBE1 160 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 TMEM234Q8WY98 164 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 THOC3Q96J01 351 aaKnown RBP15.98■□□□□ 0.15
KRT28-201ENST00000306658 FER1L6-AS2Q96M78 137 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 DPH1Q9BZG8 443 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 CPNE5Q9HCH3 593 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 ATP13A2Q9NQ11 1180 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 BATF3Q9NR55 127 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 RASSF1Q9NS23 344 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 HPF1Q9NWY4 346 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 IL20Q9NYY1 176 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 RNF6Q9Y252 685 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 WIF1Q9Y5W5 379 aa15.98■□□□□ 0.15
KRT28-201ENST00000306658 CHCHD2Q9Y6H1 151 aaPredicted RBP15.98■□□□□ 0.15
KRT28-201ENST00000306658 C2orf72A6NCS6 295 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms