RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 ZNF761Q86XN6 746 aaPredicted RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 LURAP1LQ8IV03 231 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 OR52I1Q8NGK6 324 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 TRMT10AQ8TBZ6 339 aaKnown RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 ZNF480Q8WV37 535 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 PPCDCQ96CD2 204 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 CAMK1GQ96NX5 476 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 MRPS30Q9NP92 439 aaKnown RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 RPS6KB2Q9UBS0 482 aa10.16□□□□□ -0.78
LSM3-201ENST00000306024 CDV3Q9UKY7 258 aaKnown RBP10.16□□□□□ -0.78
LSM3-201ENST00000306024 ZAR1LA6NP61 321 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 AIPO00170 330 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SOD1P00441 154 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 ARFIP1P53367 373 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SLC3A1Q07837 685 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 GAS6Q14393 721 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 METRNLQ641Q3 311 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PGBD2Q6P3X8 592 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 GSG1LQ6UXU4 331 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SLC16A13Q7RTY0 426 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 RASGRP3Q8IV61 690 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 ZNF547Q8IVP9 402 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 RNF175Q8N4F7 328 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 C1orf52Q8N6N3 182 aaKnown RBP10.15□□□□□ -0.78
LSM3-201ENST00000306024 OR10K1Q8NGX5 313 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 CCL4L1Q8NHW4 92 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 EFCAB11Q9BUY7 163 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SHARPINQ9H0F6 387 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PPP1R3EQ9H7J1 279 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SUSD2Q9UGT4 822 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 EP300Q09472 2414 aaPredicted RBP10.15□□□□□ -0.78
LSM3-201ENST00000306024 FAM74A7A6NL05 159 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 H7BY64 318 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 NDUFA2O43678 99 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PEX14O75381 377 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PDGFBP01127 241 aaPredicted RBP10.15□□□□□ -0.78
LSM3-201ENST00000306024 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 RAB28P51157 221 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 AP3S2P59780 193 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 CAMK2DQ13557 499 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 METTL11BQ5VVY1 283 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 TMEM107Q6UX40 140 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PAQR7Q86WK9 346 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 CHCHD4Q8N4Q1 142 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 ZNF614Q8N883 585 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 RELL2Q8NC24 303 aaPredicted RBP10.15□□□□□ -0.78
LSM3-201ENST00000306024 BMFQ96LC9 184 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 PRAP1Q96NZ9 151 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 C14orf105Q9NVL8 296 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 SOHLH2Q9NX45 425 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 NDRG3Q9UGV2 375 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 GPR179Q6PRD1 2367 aa10.15□□□□□ -0.78
LSM3-201ENST00000306024 TDRD6O60522 2096 aaKnown RBP10.15□□□□□ -0.79
LSM3-201ENST00000306024 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 OR5K4A6NMS3 321 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 METTL12A8MUP2 240 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 FAM25EA8MYX2 175 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 C1QCP02747 245 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 CPEP16870 476 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 AHCYP23526 432 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.79
LSM3-201ENST00000306024 RAB13P51153 203 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 TAP2Q03519 686 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 DOC2AQ14183 400 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 ST3GAL2Q16842 350 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 ALG11Q2TAA5 492 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 SFRP5Q5T4F7 317 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 SLC22A10Q63ZE4 541 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 STPG2Q8N412 459 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 OR1M1Q8NGA1 313 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 RFKQ969G6 155 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 CHMP1AQ9HD42 196 aaPredicted RBP10.15□□□□□ -0.79
LSM3-201ENST00000306024 COMMD9Q9P000 198 aa10.15□□□□□ -0.79
LSM3-201ENST00000306024 TICRRQ7Z2Z1 1910 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 MEIKINA0A087WXM9 373 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 TRBV4-1A0A0J9YWV2 114 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 C6orf47O95873 294 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 VEGFCP49767 419 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 CCR8P51685 355 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 TMPRSS9Q7Z410 1059 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 SLC9B2Q86UD5 537 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 COX14Q96I36 57 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 ATF6BQ99941 703 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 SLC19A3Q9BZV2 496 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 TRBV5-3A0A0A0MS03 114 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 LINC00587B1AMM8 73 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 TNFRSF10CO14798 259 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 KLK8O60259 260 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 PRAMEF2O60811 474 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 TGFB1P01137 390 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 F3P13726 295 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 PRG2P13727 222 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 PPP3CBP16298 524 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 HK1P19367 917 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 IMPA1P29218 277 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 CAPZA1P52907 286 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 BLOC1S1P78537 153 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 ZXDAP98168 799 aa10.14□□□□□ -0.79
LSM3-201ENST00000306024 AMZ1Q400G9 498 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms