RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 DEPDC7Q96QD5 511 aa13.12□□□□□ -0.31
RAB40A-201ENST00000304236 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
RAB40A-201ENST00000304236 COMMD3Q9UBI1 195 aa13.12□□□□□ -0.31
RAB40A-201ENST00000304236 IL20RAQ9UHF4 553 aa13.12□□□□□ -0.31
RAB40A-201ENST00000304236 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
RAB40A-201ENST00000304236 PCDHGB7Q9Y5F8 929 aa13.12□□□□□ -0.31
RAB40A-201ENST00000304236 MEIOCA2RUB1 952 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 C12orf71A8MTZ7 269 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 RNF13O43567 381 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SLC19A2O60779 497 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 HLA-DQB1P01920 261 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SLC35E2P0CK97 266 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TBXA2RP21731 343 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 DRD5P21918 477 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 GABRA3P34903 492 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 HOXD12P35452 270 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 MTNR1BP49286 362 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TPMTP51580 245 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 UBE2IP63279 158 aaKnown RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SHC2P98077 582 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 DAB2P98082 770 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 RPL6Q02878 288 aaKnown RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SMARCD3Q6STE5 483 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 Q6ZSR6 202 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 C19orf18Q8NEA5 215 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PFN4Q8NHR9 129 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 BPIFA2Q96DR5 249 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 OR2B2Q9GZK3 357 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TRIM36Q9NQ86 728 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TMEM74BQ9NUR3 256 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 KCNE5Q9UJ90 142 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 ARHGEF17Q96PE2 2063 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 LRP4O75096 1905 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 DAPL1A0PJW8 107 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 GTPBP1O00178 669 aaKnown RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PEX12O00623 359 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 CDX4O14627 284 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 LRRTM2O43300 516 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 F8A1P23610 371 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 EVX1P49640 407 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TAS2R43P59537 309 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 GALEQ14376 348 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 NDUFA5Q16718 116 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 MZT2BQ6NZ67 158 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 WDR88Q6ZMY6 472 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 RABEPKQ7Z6M1 372 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 OOSP2Q86WS3 158 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 GRAMD2AQ8IUY3 354 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 GPALPP1Q8IXQ4 340 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 CEP76Q8TAP6 659 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SLC2A12Q8TD20 617 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 NACC2Q96BF6 587 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 CCDC3Q9BQI4 270 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 IFT27Q9BW83 186 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 TRIM2Q9C040 744 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 C11orf54Q9H0W9 315 aaPredicted RBP13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PPP1R3EQ9H7J1 279 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 EVA1BQ9NVM1 165 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 PILRBQ9UKJ0 227 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
RAB40A-201ENST00000304236 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
RAB40A-201ENST00000304236 TPRP12270 2363 aaKnown RBP13.1□□□□□ -0.31
RAB40A-201ENST00000304236 FAM183AA6NL82 134 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 CHP2O43745 196 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 SLC2A2P11168 524 aaPredicted RBP13.1□□□□□ -0.31
RAB40A-201ENST00000304236 RBM34P42696 430 aaKnown RBP13.1□□□□□ -0.31
RAB40A-201ENST00000304236 LSSP48449 732 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 CAV3P56539 151 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 FIGNL1Q6PIW4 674 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 TMEM52Q8NDY8 209 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 ENKURQ8TC29 256 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 ANKRD9Q96BM1 317 aaPredicted RBP13.1□□□□□ -0.31
RAB40A-201ENST00000304236 ATP13A2Q9NQ11 1180 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 C20orf141Q9NUB4 165 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 FBXO34Q9NWN3 711 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
RAB40A-201ENST00000304236 NPIPA5A0A0B4J1W7 369 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 IGHV1OR15-9A0A0B4J2B8 117 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 A0A0B4J2E0 115 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 LINC00854A0A1B0GVQ3 168 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 A0A1B0GX12 115 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 CD8B2A6NJW9 211 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 NPIPA7E9PJI5 369 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 HPGDSO60760 199 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 PTP4A3O75365 173 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 MT-ND5P03915 603 aa13.09□□□□□ -0.31
RAB40A-201ENST00000304236 NPIPA8P0DM63 369 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms