RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 FANK1Q8TC84 345 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 ZNF524Q96C55 264 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 CRELD1Q96HD1 420 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 KLHDC3Q9BQ90 382 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 DCUN1D5Q9BTE7 237 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 CRB3Q9BUF7 120 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 PRRG3Q9BZD7 231 aa20.42■□□□□ 0.86
SMAD1-201ENST00000302085 SAGP10523 405 aaPredicted RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 CCNA2P20248 432 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 FAM199XQ6PEV8 388 aaPredicted RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 PAPD4Q6PIY7 484 aaKnown RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 TMEM205Q6UW68 189 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 C16orf47Q6ZP98 133 aaPredicted RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 CPEB2Q7Z5Q1 589 aaKnown RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 MARCH3Q86UD3 253 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 C9orf43Q8TAL5 461 aaPredicted RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 TP53INP1Q96A56 240 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 TMEM80Q96HE8 168 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 TEX12Q9BXU0 123 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 LAT2Q9GZY6 243 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 ICAM5Q9UMF0 924 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 GPR179Q6PRD1 2367 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 KDM4EB2RXH2 506 aaPredicted RBP20.41■□□□□ 0.86
SMAD1-201ENST00000302085 RCBTB2O95199 551 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 SLC2A10O95528 541 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 HMGN1P05114 100 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 TGFBR2P37173 567 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 LIPAP38571 399 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 AQP6Q13520 282 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 FHL1Q13642 323 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 THSD4Q6ZMP0 1018 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 ANKK1Q8NFD2 765 aa20.41■□□□□ 0.86
SMAD1-201ENST00000302085 SPEGQ15772 3267 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 TRAV27A0A087WT01 109 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 BHLHE40O14503 412 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 GAS1P54826 345 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 CRYZQ08257 329 aaKnown RBP20.4■□□□□ 0.86
SMAD1-201ENST00000302085 TIGD6Q17RP2 521 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 FAM69BQ5VUD6 431 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 WBP2NLQ6ICG8 309 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 CYP4Z2PQ8N1L4 340 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 OR51A7Q8NH64 312 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 C8orf44Q96CB5 159 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 TNFRSF13CQ96RJ3 184 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 MED17Q9NVC6 651 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 VPS13AQ96RL7 3174 aa20.4■□□□□ 0.86
SMAD1-201ENST00000302085 PRODHO43272 600 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 CCR4P51679 360 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 SH3BGRP55822 239 aaPredicted RBP20.39■□□□□ 0.86
SMAD1-201ENST00000302085 NFATC3Q12968 1075 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 AADACL4Q5VUY2 407 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 SMARCD3Q6STE5 483 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 TMCO5AQ8N6Q1 288 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 OR5M11Q96RB7 305 aa20.39■□□□□ 0.86
SMAD1-201ENST00000302085 A0A1W2PQD3 144 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 C17orf51A8MQB3 221 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 ALG1L2C9J202 215 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 CDX4O14627 284 aaPredicted RBP20.39■□□□□ 0.85
SMAD1-201ENST00000302085 HCN1O60741 890 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 GABARAPO95166 117 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 CD59P13987 128 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 BMP7P18075 431 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF117Q03924 483 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 DOC2BQ14184 412 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 RPL13AP3Q6NVV1 102 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 LNX2Q8N448 690 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 OR52L1Q8NGH7 329 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 OR52I1Q8NGK6 324 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 ZFAND2BQ8WV99 257 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 VMP1Q96GC9 406 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 PLEKHA8Q96JA3 519 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 LRFN5Q96NI6 719 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 LPAR4Q99677 370 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 WDR54Q9H977 334 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 ZBTB20Q9HC78 741 aaPredicted RBP20.39■□□□□ 0.85
SMAD1-201ENST00000302085 MRPS18AQ9NVS2 196 aaKnown RBP20.39■□□□□ 0.85
SMAD1-201ENST00000302085 SLC39A1Q9NY26 324 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 CLEC2DQ9UHP7 191 aa20.39■□□□□ 0.85
SMAD1-201ENST00000302085 FADS1O60427 444 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF354AO60765 605 aaPredicted RBP20.38■□□□□ 0.85
SMAD1-201ENST00000302085 KLK3P07288 261 aaPredicted RBP20.38■□□□□ 0.85
SMAD1-201ENST00000302085 CD36P16671 472 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 MST1P26927 711 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 GRK5P34947 590 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 SPCS2Q15005 226 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 ATG4DQ86TL0 474 aaPredicted RBP20.38■□□□□ 0.85
SMAD1-201ENST00000302085 OAFQ86UD1 273 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 LGALS12Q96DT0 336 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 SGTBQ96EQ0 304 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 SH3YL1Q96HL8 342 aaPredicted RBP20.38■□□□□ 0.85
SMAD1-201ENST00000302085 MCCC2Q9HCC0 563 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 NPFFR2Q9Y5X5 522 aa20.38■□□□□ 0.85
SMAD1-201ENST00000302085 COL27A1Q8IZC6 1860 aaPredicted RBP20.38■□□□□ 0.85
SMAD1-201ENST00000302085 IGKV1D-42A0A075B6H8 117 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 TRBV11-1A0A0K0K1C0 115 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 TMEM200CA6NKL6 621 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 NDUFB5O43674 189 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 CCKBRP32239 447 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 SF3A2Q15428 464 aaKnown RBP20.37■□□□□ 0.85
SMAD1-201ENST00000302085 RNLSQ5VYX0 342 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms