RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 LRIT1Q9P2V4 623 aa12.71□□□□□ -0.37
CHRFAM7A-201ENST00000299847 PTAFRP25105 342 aa12.71□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LKAAEAR1Q8TD35 194 aa12.71□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ANKRD60Q9BZ19 345 aa12.71□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TP53TG5Q9Y2B4 290 aa12.71□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SCGB2A1O75556 95 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 T-ENOLP0DO92 83 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HTD2P86397 168 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TMEM64Q6YI46 380 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF704Q6ZNC4 412 aaPredicted RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FGF13Q92913 245 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 WWTR1Q9GZV5 400 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HRH4Q9H3N8 390 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TUBB1Q9H4B7 451 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TUBG2Q9NRH3 451 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CD300AQ9UGN4 299 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PCDHB10Q9UN67 800 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NUBP2Q9Y5Y2 271 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IGKV6-21A0A0C4DH24 114 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MAOAP21397 527 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 WDR5P61964 334 aaKnown RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CTBSQ01459 385 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF750Q32MQ0 723 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ENKD1Q9H0I2 346 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CHRDQ9H2X0 955 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 KLHL13Q9P2N7 655 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC6A5Q9Y345 797 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GMDSO60547 372 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 F3P13726 295 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IDUAP35475 653 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 KEAP1Q14145 624 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BCDIN3DQ7Z5W3 292 aaKnown RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PRRC1Q96M27 445 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ELOVL3Q9HB03 270 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PISDQ9UG56 409 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LOC285095A0A1B0GVY8 99 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DNAJB5O75953 348 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CDK1P06493 297 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HBQ1P09105 142 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TAS2R20P59543 309 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MORN1Q5T089 497 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BORCS7Q96B45 105 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MRPL38Q96DV4 380 aaKnown RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RICTORQ6R327 1708 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IGKV6D-21A0A0A0MT36 114 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IL13RA1P78552 427 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 EMX1Q04741 257 aaPredicted RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HEPHL1Q6MZM0 1159 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MRPL10Q7Z7H8 261 aaKnown RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SIMC1Q8NDZ2 872 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TXLNGYQ9BZA5 131 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NAA50Q9GZZ1 169 aaKnown RBP12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR51J1Q9H342 316 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RLIMQ9NVW2 624 aa12.7□□□□□ -0.38
CHRFAM7A-201ENST00000299847 A6NIZ1 184 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CEBPZOSA8MTT3 80 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZIC2O95409 532 aaPredicted RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TGM4P49221 684 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RAP1BP61224 184 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RAP1AP62834 184 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 EGFL6Q8IUX8 553 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ADGRG5Q8IZF4 528 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GDPD1Q8N9F7 314 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF480Q8WV37 535 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ULBP3Q9BZM4 244 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 IL37Q9NZH6 218 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BET1O15155 118 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TUSC2O75896 110 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ALDOCP09972 364 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RPA2P15927 270 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SCGB2A2Q13296 93 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TNK1Q13470 666 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 OR5D18Q8NGL1 313 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GPR150Q8NGU9 434 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CTRCQ99895 268 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ANKRD10Q9NXR5 420 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FAM53CQ9NYF3 392 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 EHFQ9NZC4 300 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TAAR2Q9P1P5 351 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CNOT11Q9UKZ1 510 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SIGLEC1Q9BZZ2 1709 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MYH15Q9Y2K3 1946 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CENPBD1B2RD01 187 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GASTP01350 101 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SNRNP70P08621 437 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLC6A8P48029 635 aa12.69□□□□□ -0.38
CHRFAM7A-201ENST00000299847 FGL2Q14314 439 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms