RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
TMEM41B-201ENST00000299596 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
TMEM41B-201ENST00000299596 NIPBLQ6KC79 2804 aaeCLIP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 UBTFL6P0CB48 400 aaPredicted RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 ENPP1P22413 925 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 CHI3L1P36222 383 aaPredicted RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 KHKP50053 298 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 CASP9P55211 416 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 SESN3P58005 492 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 TYW3Q6IPR3 259 aaKnown RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 TNFAIP8L2Q6P589 184 aaPredicted RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 NUFIP2Q7Z417 695 aaKnown RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 SPATA19Q7Z5L4 167 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 BIVMQ86UB2 503 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 TRIML2Q8N7C3 387 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 RAB8BQ92930 207 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 ROPN1LQ96C74 230 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 C18orf12Q96KH6 178 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 CCDC115Q96NT0 180 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 SLC35A5Q9BS91 424 aa12.36□□□□□ -0.43
TMEM41B-201ENST00000299596 ACANP16112 2415 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 NUP214P35658 2090 aaPredicted RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 A0A1W2PNR3 127 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 TRPC5OSA6NMA1 111 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 KIAA0513O60268 411 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 GCM2O75603 506 aaPredicted RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 PGM1P36871 562 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 TXNL4AP83876 142 aaKnown RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 HPCAP84074 193 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 P2RY6Q15077 328 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 MAPK14Q16539 360 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 SFRP5Q5T4F7 317 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 PRSS57Q6UWY2 283 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 TFAP2EQ6VUC0 442 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 PLEKHM3Q6ZWE6 761 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 WFDC8Q8IUA0 241 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 KRTAP1-3Q8IUG1 177 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 GABRG1Q8N1C3 465 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 ZNF619Q8N2I2 560 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 SLC25A43Q8WUT9 341 aaPredicted RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 OR5B2Q96R09 309 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 ACER3Q9NUN7 267 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 AIG1Q9NVV5 245 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 THAP1Q9NVV9 213 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 SPIN1Q9Y657 262 aaPredicted RBP12.35□□□□□ -0.43
TMEM41B-201ENST00000299596 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 CCDC154A6NI56 674 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 SDHDO14521 159 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 HDAC3O15379 428 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 CYTIPO60759 359 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ALDOCP09972 364 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 FKBP2P26885 142 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 APOBEC1P41238 236 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ANXA11P50995 505 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 SLC18A1P54219 525 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 UFM1P61960 85 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 CSNK2A1P68400 391 aaPredicted RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 KCNJ10P78508 379 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 MERTKQ12866 999 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 Q5PR19 223 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ATG16L1Q676U5 607 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ZNF704Q6ZNC4 412 aaPredicted RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 TMPPEQ6ZT21 453 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ZNF563Q8TA94 476 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 HSD17B8Q92506 261 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 S100PBPQ96BU1 408 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ZBTB9Q96C00 473 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 PLPPR2Q96GM1 343 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 TEX37Q96LM6 180 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 OR52E6Q96RD3 313 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 PANX1Q96RD7 426 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 PSD2Q9BQI7 771 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 QRSL1Q9H0R6 528 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 GSX1Q9H4S2 264 aaPredicted RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 NGBQ9NPG2 151 aa12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 EXOSC3Q9NQT5 275 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 FLNAP21333 2647 aaKnown RBP12.34□□□□□ -0.43
TMEM41B-201ENST00000299596 IGHV3-15A0A0B4J1V0 119 aa12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 ZNF724A8MTY0 619 aa12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 HMGN4O00479 90 aa12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 TMCC2O75069 709 aa12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 SNNO75324 88 aaPredicted RBP12.33□□□□□ -0.44
TMEM41B-201ENST00000299596 H6PDO95479 791 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms