RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 MXD1Q05195 221 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 SRSF11Q05519 484 aaKnown RBP6.17□□□□□ -1.42
TMC1-201ENST00000297784 C2orf80Q0P641 193 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 FGFBP1Q14512 234 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 EXOC3L2Q2M3D2 409 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 HACD4Q5VWC8 232 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 C18orf63Q68DL7 685 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 CFAP77Q6ZQR2 320 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 QSOX2Q6ZRP7 698 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 USP53Q70EK8 1073 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 UXS1Q8NBZ7 420 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 CEP76Q8TAP6 659 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 SLC9A6Q92581 669 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 CCDC74AQ96AQ1 378 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 DACT3Q96B18 629 aaPredicted RBP6.17□□□□□ -1.42
TMC1-201ENST00000297784 NXPE2Q96DL1 559 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 MTERF3Q96E29 417 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 TPD52L3Q96J77 140 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 LINC00052Q96N35 136 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 ZNF285Q96NJ3 590 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 USB1Q9BQ65 265 aaKnown RBP6.17□□□□□ -1.42
TMC1-201ENST00000297784 SERHL2Q9H4I8 314 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 SEMA5BQ9P283 1151 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 CES1P1Q9UKY3 287 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 SLC6A14Q9UN76 642 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 LIPT1Q9Y234 373 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 SF3B6Q9Y3B4 125 aaKnown RBP6.17□□□□□ -1.42
TMC1-201ENST00000297784 SESN1Q9Y6P5 492 aa6.17□□□□□ -1.42
TMC1-201ENST00000297784 MEIKINA0A087WXM9 373 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 LNP1A1A4G5 178 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZNF98A6NK75 572 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 A8MXK9 166 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 LALBAP00709 142 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MPLP40238 635 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 FRKP42685 505 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 ASMTP46597 345 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 HOXA1P49639 335 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 PCBP4P57723 403 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 HBA1P69905 142 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 BTN3A2P78410 334 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SPIBQ01892 262 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 DUSP2Q05923 314 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CAMK2DQ13557 499 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 RUNX2Q13950 521 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 P2RY14Q15391 338 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CPTPQ5TA50 214 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CD200R1LQ6Q8B3 271 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 RRM2BQ7LG56 351 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 NUDT13Q86X67 352 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MS4A15Q8N5U1 240 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 EID2Q8N6I1 236 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 OR2T4Q8NH00 348 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CDC26Q8NHZ8 85 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 NUDT22Q9BRQ3 303 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 DUSP26Q9BV47 211 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 DUSP23Q9BVJ7 150 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ZNF416Q9BWM5 594 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 FAM120CQ9NX05 1096 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 SDHAF2Q9NX18 166 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 AHSPQ9NZD4 102 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 NPTNQ9Y639 398 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 COL5A1P20908 1838 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 GLOD5A6NK44 160 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 M0R129 80 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 WWP2O00308 870 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 AKAP8O43823 692 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 SLC19A2O60779 497 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ADAM11O75078 769 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 PNLIPP16233 465 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 C4BPBP20851 252 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SOX18P35713 384 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TSFMP43897 325 aaKnown RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 RAG2P55895 527 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 VSX2P58304 361 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 GAB1Q13480 694 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TPBGQ13641 420 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GNA13Q14344 377 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GPR176Q14439 515 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 OCLNQ16625 522 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TUSC1Q2TAM9 212 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 AMZ1Q400G9 498 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 IFI44LQ53G44 452 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 NHLRC3Q5JS37 347 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 LIPKQ5VXJ0 399 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 MZT2AQ6P582 158 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 WDR74Q6RFH5 385 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 IKBIPQ70UQ0 350 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 OR5T2Q8NGG2 359 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 PHF21AQ96BD5 680 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TCTN2Q96GX1 697 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 ATF6BQ99941 703 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 CHRNA10Q9GZZ6 450 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 PCDHB16Q9NRJ7 776 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 SCP2D1Q9UJQ7 156 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 GSTK1Q9Y2Q3 226 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 TMEM184BQ9Y519 407 aaPredicted RBP6.16□□□□□ -1.42
TMC1-201ENST00000297784 TLCD2A6NGC4 264 aa6.16□□□□□ -1.42
TMC1-201ENST00000297784 PCP4L1A6NKN8 68 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms