RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 LRRC37A5PQ49AS3 106 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PPM1JQ5JR12 505 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PINX1Q96BK5 328 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 AMDHD1Q96NU7 426 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CCM2Q9BSQ5 444 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 STRCQ7RTU9 1775 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TGIF2-C20orf24A0A0A6YYL0 155 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF850A8MQ14 1090 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 DCDC2CA8MYV0 355 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 J3QLW9 94 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TOX3O15405 576 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF19P17023 458 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 BMP5P22003 454 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TACR1P25103 407 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 RPS12P25398 132 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 HOXD13P35453 343 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 EPHA5P54756 1037 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 C1QTNF8P60827 252 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 HLA-BQ31612 363 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 LRIT3Q3SXY7 679 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 FAM205BPQ63HN1 556 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PRSS42Q7Z5A4 293 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR6J1Q8NGC5 347 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 FERD3LQ96RJ6 166 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM175Q9BSA9 504 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 NOSIPQ9Y314 301 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF541Q9H0D2 1346 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TRDV1A0A1B0GX56 115 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 LRCH4O75427 683 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PDGFBP01127 241 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MMP10P09238 476 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ITGB5P18084 799 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SUOXP51687 545 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TAF1CQ15572 869 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 AMZ1Q400G9 498 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 FUT10Q6P4F1 479 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SIDT2Q8NBJ9 832 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 USB1Q9BQ65 265 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CLSTN3Q9BQT9 956 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 Q9N2J8 555 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PDE7BQ9NP56 450 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PHPT1Q9NRX4 125 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 NYNRINQ9P2P1 1898 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SLC25A14O95258 325 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ENGP17813 658 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PDZD11Q5EBL8 140 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR4N5Q8IXE1 308 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 GPR135Q8IZ08 494 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR9K2Q8NGE7 335 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CASTOR1Q8WTX7 329 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SLC46A1Q96NT5 459 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SLC39A9Q9NUM3 307 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PITPNC1Q9UKF7 332 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 POMT2Q9UKY4 750 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ABCD4O14678 606 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 FZD7O75084 574 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 HAND1O96004 215 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 H2AFB1P0C5Y9 115 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 RRASP10301 218 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CCR6P51684 374 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MEP1AQ16819 746 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR6C4Q8NGE1 309 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ACTR3CQ9C0K3 210 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ANKRD19PQ9H560 264 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 DCAF13Q9NV06 445 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SUSD2Q9UGT4 822 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MUTYHQ9UIF7 546 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 GOLT1BQ9Y3E0 138 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ACANP16112 2415 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR5H14A6NHG9 310 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 RPS3AP61247 264 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 HBA1P69905 142 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CDONQ4KMG0 1287 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM135Q86UB9 458 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 BPIFCQ8NFQ6 507 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 UBALD1Q8TB05 177 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PIGQQ9BRB3 760 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 G3V3Q6 166 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 GJB1P08034 283 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CTXN2P0C2S0 81 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 KLRC2P26717 231 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 AQP2P41181 271 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MRPS5P82675 430 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 PCLAFQ15004 111 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OTOP1Q7RTM1 612 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CDH26Q8IXH8 852 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 DND1Q8IYX4 353 aaKnown RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR51A7Q8NH64 312 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR5W2Q8NH69 310 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 SFXN2Q96NB2 322 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 CIB3Q96Q77 187 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-201ENST00000297405 FCRL5Q96RD9 977 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 ACKR4Q9NPB9 350 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR6C68A6NDL8 312 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 OR5G3P0C626 314 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 NAT2P11245 290 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MTNR1BP49286 362 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 MAXP61244 160 aa4.57□□□□□ -1.68
CSMD3-201ENST00000297405 TNFAIP8L2Q6P589 184 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms