RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 A0A075B6Q4 140 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 NPIPB9F8W1W9 429 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 BCAT2O15382 392 aaPredicted RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 PTP4A3O75365 173 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 REM1O75628 298 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 IGHA1P01876 353 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 CELP19835 753 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 GABRA5P31644 462 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 TNFSF8P32971 234 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SDC2P34741 201 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 AFF3P51826 1226 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 EPHA4P54764 986 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 HSD11B2P80365 405 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 FABP5Q01469 135 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 ZNF485Q8NCK3 441 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 PTP4A1Q93096 173 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 TSLPQ969D9 159 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SLC30A2Q9BRI3 323 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 ZNF649Q9BS31 505 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 OR8D2Q9GZM6 311 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 CHRDQ9H2X0 955 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 EVA1AQ9H8M9 152 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 ISYNA1Q9NPH2 558 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 LANCL2Q9NS86 450 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 PRODH2Q9UF12 536 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 IGHV1OR21-1A0A087WYE8 117 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 A0A1B0GVT2 93 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 RIIAD1A6NNX1 92 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 CLPSP04118 112 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 DCNP07585 359 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 GUSBP08236 651 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 MRPL3P09001 348 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 CLUP10909 449 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 RBM34P42696 430 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 PSMD4P55036 377 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 COPZ1P61923 177 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 HNRNPA0Q13151 305 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 MED25Q71SY5 747 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 CCDC190Q86UF4 302 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 KLBQ86Z14 1044 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 PRSS58Q8IYP2 241 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 POC5Q8NA72 575 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 SLC25A46Q96AG3 418 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 ZNF426Q9BUY5 554 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 HDHD5Q9BXW7 423 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 RAB33BQ9H082 229 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 FN3KQ9H479 309 aa12.88□□□□□ -0.35
NXF1-201ENST00000294172 ISG20L2Q9H9L3 353 aaKnown RBP12.88□□□□□ -0.35
NXF1-201ENST00000294172 CACNA1IQ9P0X4 2223 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 LRRN3E7EW58 273 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 LOC110117498-PIK3R3F6TDL0 507 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 AKAP8O43823 692 aaKnown RBP12.87□□□□□ -0.35
NXF1-201ENST00000294172 MSL3P1P0C860 447 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 HPGDP15428 266 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 EIF2B2P49770 351 aaKnown RBP12.87□□□□□ -0.35
NXF1-201ENST00000294172 CFHR1Q03591 330 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 ZNF322Q6U7Q0 402 aaPredicted RBP12.87□□□□□ -0.35
NXF1-201ENST00000294172 RTL4Q6ZR62 310 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 QSOX2Q6ZRP7 698 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 SLC35F3Q8IY50 421 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 SDR16C5Q8N3Y7 309 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 SLC25A45Q8N413 288 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 CAMKK1Q8N5S9 505 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 ACBD7Q8N6N7 88 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 TMEM99Q8N816 258 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 HTRA1Q92743 480 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 LRRN3Q9H3W5 708 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 FBXL4Q9UKA2 621 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 GMEB2Q9UKD1 530 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 CLCA3PQ9Y6N3 262 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 AGRPO00253 132 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 DUX1O43812 170 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 IL1AP01583 271 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 GYPBP06028 91 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 CCR4P51679 360 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 DMWDQ09019 674 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 CRMP1Q14194 572 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 AGAP7PQ5VUJ5 663 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 PLXDC1Q8IUK5 500 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 TMEM151BQ8IW70 566 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 LRRC17Q8N6Y2 441 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 PELOQ9BRX2 385 aaKnown RBP12.87□□□□□ -0.35
NXF1-201ENST00000294172 ALG8Q9BVK2 526 aa12.87□□□□□ -0.35
NXF1-201ENST00000294172 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms