RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 KLHL1Q9NR64 748 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 SATB2Q9UPW6 733 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 EXOGQ9Y2C4 368 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 HS3ST3A1Q9Y663 406 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 RIIAD1A6NNX1 92 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 RCBTB2O95199 551 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 IGHA1P01876 353 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 AGAP6Q5VW22 663 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 KIAA0895LQ68EN5 471 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 RAB43Q86YS6 212 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 GID4Q8IVV7 300 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 LRRC17Q8N6Y2 441 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 C19orf47Q8N9M1 422 aaKnown RBP14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 C7orf57Q8NEG2 295 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 SDR9C7Q8NEX9 313 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 OR4K13Q8NH42 304 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 DNAJA3Q96EY1 480 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 AGAP4Q96P64 663 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 FN3KQ9H479 309 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 CLEC4AQ9UMR7 237 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 ERVK-19Q9WJR5 959 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 GRIP1Q9Y3R0 1128 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 MAU2Q9Y6X3 613 aa14.59□□□□□ -0.07
NCKIPSD-201ENST00000294129 LRP4O75096 1905 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 KRT8P05787 483 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 CHRNB1P11230 501 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 FZD5Q13467 585 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 CCINQ13939 588 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 TMEM44Q2T9K0 475 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 TMEM91Q6ZNR0 172 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 RFLNBQ8N5W9 214 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 ARIH2OSQ8N7S6 290 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 TOR1AIP2Q8NFQ8 470 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 UBASH3BQ8TF42 649 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 RELTQ969Z4 430 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 KLHDC7BQ96G42 594 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 LRRC61Q9BV99 259 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 SEMA6CQ9H3T2 930 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 SOHLH2Q9NX45 425 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 LRIT1Q9P2V4 623 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 NOX1Q9Y5S8 564 aa14.58□□□□□ -0.07
NCKIPSD-201ENST00000294129 POLR1CO15160 346 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 RNF13O43567 381 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 SLC35E2P0CK97 266 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 IL9P15248 144 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 IGFBP4P22692 258 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 E2F1Q01094 437 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 XKRXQ6PP77 449 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR52E2Q8NGJ4 325 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 CTHRC1Q96CG8 243 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 ZMYND19Q96E35 227 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 MMABQ96EY8 250 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 C4orf36Q96KX1 117 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 ERMAPQ96PL5 475 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 LMF1Q96S06 567 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 TEAD3Q99594 435 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 PPIL3Q9H2H8 161 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 CCDC86Q9H6F5 360 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 POMT2Q9UKY4 750 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 GTPBP1O00178 669 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 SLC2A2P11168 524 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 SHC1P29353 583 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 FGF9P31371 208 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 NAA10P41227 235 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 CCR4P51679 360 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR12D2P58182 307 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 TRIQKQ629K1 86 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 Q8N402 240 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 LNX2Q8N448 690 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 FAM98AQ8NCA5 519 aaKnown RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 SMRP1Q8NCR6 262 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 RCBTB1Q8NDN9 531 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR13C5Q8NGS8 318 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR52N1Q8NH53 320 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 ATF6BQ99941 703 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 C8orf33Q9H7E9 229 aaPredicted RBP14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 BABAM2Q9NXR7 383 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 RPS6KB2Q9UBS0 482 aa14.58□□□□□ -0.08
NCKIPSD-201ENST00000294129 A8MUA0 341 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 IMPA2O14732 288 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 SDC3O75056 442 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 CTBP2P56545 445 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 GARNL3Q5VVW2 1013 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 KISS1RQ969F8 398 aaPredicted RBP14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 SENP5Q96HI0 755 aaPredicted RBP14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 ZNF559Q9BR84 538 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 RNF32Q9H0A6 362 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 ISYNA1Q9NPH2 558 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 ADAM18Q9Y3Q7 739 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 CCDC182A6NF36 153 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 NKX2-2O95096 273 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 PYCR1P32322 319 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR10A3P58181 314 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 CD200R1LQ6Q8B3 271 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 KIRREL2Q6UWL6 708 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 NR2C2APQ86WQ0 139 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 RNF113BQ8IZP6 322 aaKnown RBP14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 C17orf47Q8NEP4 570 aa14.57□□□□□ -0.08
NCKIPSD-201ENST00000294129 OR5W2Q8NH69 310 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms