RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CDK4P11802 303 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 GPX2P18283 190 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 EIF2DP41214 584 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ERVFC1P60507 584 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 DEDD2Q8WXF8 326 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 C7orf34Q96L11 122 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 TSNAXQ99598 290 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 C19orf43Q9BQ61 176 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 RGCCQ9H4X1 137 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 METTL15A6NJ78 407 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 HTR3BO95264 441 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 LCATP04180 440 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 XKR7Q5GH72 579 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 MRPL2Q5T653 305 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 PRR22Q8IZ63 422 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 LSM14AQ8ND56 463 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 OR2S2Q9NQN1 319 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 LRIT1Q9P2V4 623 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF736B4DX44 427 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 GOSR2O14653 212 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 CRTAPO75718 401 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 GASTP01350 101 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 IGHEP01854 428 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ARSBP15848 533 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 CHRNEQ04844 493 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 RNF175Q8N4F7 328 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 TM4SF18Q96CE8 201 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 FAM171A2A8MVW0 826 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 NARSO43776 548 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 CER1O95813 267 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 NUDT7P0C024 238 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 SYNPO2LQ9H987 977 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF264O43296 627 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 SLC22A5O76082 557 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 RAC2P15153 192 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 PFN3P60673 137 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 PCBD1P61457 104 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 PM20D2Q8IYS1 436 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 RRNAD1Q96FB5 475 aaKnown RBP11.95□□□□□ -0.5
PTCD1-201ENST00000292478 LYSMD1Q96S90 227 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF281Q9Y2X9 895 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 HS3ST3A1Q9Y663 406 aa11.95□□□□□ -0.5
PTCD1-201ENST00000292478 TRAV27A0A087WT01 109 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 H3BML4 177 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 SCGB2A1O75556 95 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PLATP00750 562 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 IGLV3-25P01717 112 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 IGHG1P01857 330 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 S100PP25815 95 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 C21orf33P30042 268 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 RELAQ04206 551 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 ARSJQ5FYB0 599 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 AFMIDQ63HM1 303 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 SGPP2Q8IWX5 399 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 OR51J1Q9H342 316 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 SLC6A20Q9NP91 592 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PHIPQ8WWQ0 1821 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 J3KTA2 159 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 ADAM23O75077 832 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 MPIG6BO95866 241 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 TFP02787 698 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 SERPINA5P05154 406 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 SFTPDP35247 375 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 APLNRP35414 380 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 GPR18Q14330 331 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 FAM71E1Q6IPT2 247 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 CMIPQ8IY22 773 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 LILRA2Q8N149 483 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 POLHQ9Y253 713 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 MMACHCQ9Y4U1 282 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 RFPL3O75679 317 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF26P17031 533 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 HMGA1P17096 107 aaKnown RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 HNRNPFP52597 415 aaKnown RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 ZNF169Q14929 603 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PLK5Q496M5 336 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 CCNJQ5T5M9 372 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 HENMT1Q5T8I9 393 aaKnown RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 TECPR1Q7Z6L1 1165 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 OR2T35Q8NGX2 323 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PPP1R35Q8TAP8 253 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
PTCD1-201ENST00000292478 H3BNC9 293 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 AP1G1O43747 822 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 PVRP15151 417 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 DRD5P21918 477 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 TNFSF8P32971 234 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 FASLGP48023 281 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 KIAA1024LP59773 190 aa11.94□□□□□ -0.5
PTCD1-201ENST00000292478 UBE2NLQ5JXB2 153 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms