RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LGALS14Q8TCE9 139 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 OR2M2Q96R28 347 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 NXF5Q9H1B4 397 aaKnown RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 TNFRSF12AQ9NP84 129 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 NUMBLQ9Y6R0 609 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 HLA-AP01891 365 aaKnown RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ARAFP10398 606 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 RRAS2P62070 204 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF33BQ06732 778 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 PRICKLE2Q7Z3G6 844 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF546Q86UE3 836 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 DDIT4LQ96D03 193 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 UHRF1Q96T88 793 aaPredicted RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 APOBEC3BQ9UH17 382 aaKnown RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 F5H5K5 113 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 VEGFCP49767 419 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 SLC9A3R2Q15599 337 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 PLK5Q496M5 336 aa14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 DAZLQ92904 295 aaKnown RBP14.35□□□□□ -0.11
SHROOM4-201ENST00000289292 A0A0A6YYC8 382 aaPredicted RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 I3L1I5 382 aaPredicted RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ADAM12O43184 909 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 F13BP05160 661 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 GAAP10253 952 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 TPT1P13693 172 aaKnown RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CDK2P24941 298 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 RAB4BP61018 213 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 LTB4RQ15722 352 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 PTRH1Q86Y79 214 aaKnown RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 GPR78Q96P69 363 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 PLCH1Q4KWH8 1693 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 FADS1O60427 444 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 DIRAS3O95661 229 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 IFNGR1P15260 489 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ARNTP27540 789 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SLC1A3P43003 542 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 TLE3Q04726 772 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SRYQ05066 204 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 OR7A5Q15622 319 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF417Q8TAU3 575 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SEC22AQ96IW7 307 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 HRASLS5Q96KN8 279 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 C17orf105B2RV13 164 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SNAPINO95295 136 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 PVRP15151 417 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 RPS19P39019 145 aaKnown RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ELOAQ14241 798 aaKnown RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 C14orf28Q4W4Y0 310 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 PDSS1Q5T2R2 415 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ZNF322Q6U7Q0 402 aaPredicted RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 DPPA4Q7L190 304 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 GLB1L2Q8IW92 636 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 C12orf45Q8N5I9 185 aaPredicted RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SENP5Q96HI0 755 aaPredicted RBP14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CASD1Q96PB1 797 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 TEX51A0A1B0GUA7 166 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CDHR4A6H8M9 788 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 TRIM64A6NGJ6 449 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 B4GALT3O60512 393 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 IFNA1P01562 189 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CHATP28329 748 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 ARL3P36405 182 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 GDNFP39905 211 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 PRSS45Q7RTY3 260 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CDRT4Q8N9R6 151 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 OR1J4Q8NGS1 313 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 SGCZQ96LD1 299 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 MYADMQ96S97 322 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 INTS14Q96SY0 518 aa14.34□□□□□ -0.11
SHROOM4-201ENST00000289292 CDC14CA4D256 554 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 FAM221BA6H8Z2 402 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 SLC9B1P1A6NJY1 282 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 HOXB5P09067 269 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 RAB3AP20336 220 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 ELAVL4P26378 380 aaKnown RBP14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 ETV5P41161 510 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 GIPRP48546 466 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 IDH3GP51553 393 aaPredicted RBP14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 DLX2Q07687 328 aaPredicted RBP14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 UEVLDQ8IX04 471 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 TUBG2Q9NRH3 451 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 RLIMQ9NVW2 624 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 TESQ9UGI8 421 aaKnown RBP14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 A0A0B4J2A0 478 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 TOR1AO14656 332 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 BRINP1O60477 761 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 PDGFAP04085 211 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 IGFBP1P08833 259 aaPredicted RBP14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 CXADRP78310 365 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 FAPQ12884 760 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 CCINQ13939 588 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 GLCCI1Q86VQ1 547 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 SIAH3Q8IW03 269 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 LILRB2Q8N423 598 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 TMEM174Q8WUU8 243 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 MED30Q96HR3 178 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 SHPKQ9UHJ6 478 aa14.33□□□□□ -0.11
SHROOM4-201ENST00000289292 GMDSO60547 372 aa14.33□□□□□ -0.12
SHROOM4-201ENST00000289292 ESCO2Q56NI9 601 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms