RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RADILQ96JH8 1075 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 FAM71F1Q96KD3 344 aaPredicted RBP15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 SLAMF7Q9NQ25 335 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 APOBEC3BQ9UH17 382 aaKnown RBP15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 RNF215Q9Y6U7 377 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 MYH1P12882 1939 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 MYH4Q9Y623 1939 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 LDB3O75112 727 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 RBMS1P29558 406 aaKnown RBP15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 CHRNEQ04844 493 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 ENTPD8Q5MY95 495 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 CD276Q5ZPR3 534 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 PAQR8Q8TEZ7 354 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 CSNK1G1Q9HCP0 422 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 A0A0D9SG52 128 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 OR7A17O14581 309 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 PIP5K1CO60331 668 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 TGM4P49221 684 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 ISL1P61371 349 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 BEX5Q5H9J7 111 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 FAM69BQ5VUD6 431 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 LIPIQ6XZB0 460 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 STK35Q8TDR2 534 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 PKMYT1Q99640 499 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 ALOXE3Q9BYJ1 711 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 SCG5P05408 212 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 PIGAP37287 484 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 AKR1C2P52895 323 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 LRRC46Q96FV0 321 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 ST6GALNAC5Q9BVH7 336 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 USP3Q9Y6I4 520 aa15.43■□□□□ 0.06
SH3RF1-201ENST00000284637 TTLL8A6PVC2 850 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 RAF1P04049 648 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 TGM1P22735 817 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC35A2P78381 396 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SMUG1Q53HV7 270 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 MEPCEQ7L2J0 689 aaKnown RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 OR6V1Q8N148 313 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 GPR34Q9UPC5 381 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF142P52746 1687 aaPredicted RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 IFNA1P01562 189 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 ZDHHC11BP0C7U3 371 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 PSMB5P28074 263 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 S100A11P31949 105 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 CXADRP78310 365 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 PRR22Q8IZ63 422 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 PXT1Q8NFP0 134 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 KCTD12Q96CX2 325 aaKnown RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 HRASLS5Q96KN8 279 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 OR5M11Q96RB7 305 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SERINC2Q96SA4 455 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 MRI1Q9BV20 369 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 TMEM121BQ9BXQ6 578 aaPredicted RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF175Q9Y473 711 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 DNAJC25-GNG10A0A024R161 153 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SLC34A2O95436 690 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 HHEXQ03014 270 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 APOOLQ6UXV4 268 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 CD163Q86VB7 1156 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 OR51T1Q8NGJ9 327 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SCARB1Q8WTV0 552 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 MYLIPQ8WY64 445 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 PDLIM5Q96HC4 596 aaKnown RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 PCDHGA6Q9Y5G7 932 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 CNMDO75829 334 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SNRNP70P08621 437 aaKnown RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 SUOXP51687 545 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 KIAA1024LP59773 190 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 RPS25P62851 125 aaKnown RBP15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 GPR50Q13585 617 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 MARCH8Q5T0T0 291 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF680Q8NEM1 530 aa15.42■□□□□ 0.06
SH3RF1-201ENST00000284637 HTR3BO95264 441 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 BDKRB2P30411 391 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ETV6P41212 452 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 EEF1A1P5Q5VTE0 462 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 SAMD11Q96NU1 681 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 PLSCR3Q9NRY6 295 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 OSGIN1Q9UJX0 560 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 HMX2A2RU54 273 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 SEC14L5O43304 696 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 PRICKLE3O43900 615 aaPredicted RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 EGFP01133 1207 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 GAAP10253 952 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ALDH3B1P43353 468 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 GBX1Q14549 363 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ZNF585AQ6P3V2 769 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ISL2Q96A47 359 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 FOXN4Q96NZ1 517 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 SYT3Q9BQG1 590 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 SULT4A1Q9BR01 284 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 WDR83Q9BRX9 315 aaKnown RBP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 LRP6O75581 1613 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 HRGP04196 525 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 TCRBP04435 133 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 HNRNPA1P09651 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 ARAFP10398 606 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 C5AR1P21730 350 aa15.41■□□□□ 0.06
SH3RF1-201ENST00000284637 IL13RA1P78552 427 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms