RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CD79BP40259 229 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 IDH3AP50213 366 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 POLR2JP52435 117 aaKnown RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 CARD18P57730 90 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 LRRC74AQ0VAA2 488 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 ZNF239Q16600 458 aaKnown RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 HDXQ7Z353 690 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 AURKBQ96GD4 344 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 GMPPAQ96IJ6 420 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 TRNT1Q96Q11 434 aaKnown RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 A0A1W2PNR3 127 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 SASH3O75995 380 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 ATE1O95260 518 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 CD1EP15812 388 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 PCYT1AP49585 367 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 SESN3P58005 492 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 SELENBP1Q13228 472 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 PDSS1Q5T2R2 415 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 FUNDC1Q8IVP5 155 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 MIER2Q8N344 545 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 OR6K3Q8NGY3 331 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 RNF128Q8TEB7 428 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 ABHD3Q8WU67 409 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 OIT3Q8WWZ8 545 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 ST8SIA1Q92185 356 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 WFIKKN1Q96NZ8 548 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 TCF7L2Q9NQB0 619 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 KLHL28Q9NXS3 571 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 C6orf203Q9P0P8 240 aaPredicted RBP12.88□□□□□ -0.35
HMGN3-201ENST00000275036 SLC35A3Q9Y2D2 325 aa12.88□□□□□ -0.35
HMGN3-201ENST00000275036 NF1P21359 2839 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 IGHV3-15A0A0B4J1V0 119 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 FAM234BA2RU67 622 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 DEFB108AA8MXU0 73 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 TGDSO95455 350 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 PLGP00747 810 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 ZCCHC18P0CG32 403 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 ETFAP13804 333 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 POU2F1P14859 743 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 HOXB9P17482 250 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 PGCP20142 388 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 KLK2P20151 261 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 RPS4Y1P22090 263 aaKnown RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 AGTR1P30556 359 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 UGT2B10P36537 528 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 PPP2R2AP63151 447 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 KCNJ10P78508 379 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 HPCAP84074 193 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 LRRC74BQ6ZQY2 392 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 MSANTD1Q6ZTZ1 278 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 ZNF550Q7Z398 422 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 CNOT9Q92600 299 aaKnown RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 GTF2H4Q92759 462 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 CPNE4Q96A23 557 aaPredicted RBP12.87□□□□□ -0.35
HMGN3-201ENST00000275036 VIPAS39Q9H9C1 493 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 ACER3Q9NUN7 267 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 ELOVL5Q9NYP7 299 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 LIPT1Q9Y234 373 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
HMGN3-201ENST00000275036 SETD2Q9BYW2 2564 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ACANP16112 2415 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 GJE1A6NN92 205 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 AP3D1O14617 1153 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 POLR3GO15318 223 aaPredicted RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 KRT75O95678 551 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ENPP1P22413 925 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 RYKP34925 604 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 KCNJ5P48544 419 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 AQP5P55064 265 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 CTBP2P56545 445 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 MERTKQ12866 999 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 EXOC3L2Q2M3D2 409 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 FBXW10Q5XX13 1052 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 C3orf33Q6P1S2 294 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 SLC2A7Q6PXP3 512 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 DYDC1Q8WWB3 177 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 CKAP2Q8WWK9 683 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ITCHQ96J02 903 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 SLC39A3Q9BRY0 314 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 CCDC106Q9BWC9 280 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 SLC52A3Q9NQ40 469 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
HMGN3-201ENST00000275036 GLRX2Q9NS18 164 aa12.86□□□□□ -0.35
HMGN3-201ENST00000275036 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms