RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ULBP3Q9BZM4 244 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 RYDENQ9NUL5 291 aaKnown RBP14.08□□□□□ -0.15
COPS3-201ENST00000268717 CLN6Q9NWW5 311 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 CNOT2Q9NZN8 540 aaKnown RBP14.08□□□□□ -0.15
COPS3-201ENST00000268717 PSORS1C1Q9UIG5 152 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 MED31Q9Y3C7 131 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 CDH10Q9Y6N8 788 aa14.08□□□□□ -0.15
COPS3-201ENST00000268717 CLCA1A8K7I4 914 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 RGS10O43665 173 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ADAM11O75078 769 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 REM1O75628 298 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 JMJD7P0C870 316 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ZNF28P17035 718 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 NAGAP17050 411 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 SLC6A8P48029 635 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 COPZ1P61923 177 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 EFR3AQ14156 821 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ALG10BQ5I7T1 473 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 DCAF12Q5T6F0 453 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 TMEM236Q5W0B7 351 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 FAAH2Q6GMR7 532 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 LCN10Q6JVE6 187 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 WDR88Q6ZMY6 472 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ZNF620Q6ZNG0 422 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 CDK20Q8IZL9 346 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 NLGN4XQ8N0W4 816 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ZNF248Q8NDW4 579 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
COPS3-201ENST00000268717 OMA1Q96E52 524 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 ADOQ96SZ5 270 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 DDA1Q9BW61 102 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 TEX12Q9BXU0 123 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 SLC19A3Q9BZV2 496 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 LAT2Q9GZY6 243 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 SELENONQ9NZV5 590 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 RPS6KB2Q9UBS0 482 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 PISDQ9UG56 409 aa14.08□□□□□ -0.16
COPS3-201ENST00000268717 NBEAQ8NFP9 2946 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 PTGES3LE9PB15 166 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 RRP8O43159 456 aaKnown RBP14.07□□□□□ -0.16
COPS3-201ENST00000268717 ZNF264O43296 627 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 EIF4E2O60573 245 aaKnown RBP14.07□□□□□ -0.16
COPS3-201ENST00000268717 PIPP12273 146 aaPredicted RBP14.07□□□□□ -0.16
COPS3-201ENST00000268717 PCMT1P22061 227 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 PCYT1AP49585 367 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 EFNB1P98172 346 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 GINS1Q14691 196 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 NCF4Q15080 339 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 OCLNQ16625 522 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 SMN1Q16637 294 aaKnown RBP14.07□□□□□ -0.16
COPS3-201ENST00000268717 MEDAGQ5VYS4 303 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 MISPQ8IVT2 679 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 FAM26EQ8N5C1 309 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 OR13F1Q8NGS4 319 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 MYDGFQ969H8 173 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 C12orf10Q9HB07 376 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 MED17Q9NVC6 651 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 CEPT1Q9Y6K0 416 aa14.07□□□□□ -0.16
COPS3-201ENST00000268717 A0A1W2PQ72 361 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 EFCAB10A6NFE3 127 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 PRKNO60260 465 aaPredicted RBP14.06□□□□□ -0.16
COPS3-201ENST00000268717 ICOSLGO75144 302 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 IGFBP1P08833 259 aaPredicted RBP14.06□□□□□ -0.16
COPS3-201ENST00000268717 ETV5P41161 510 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 SLC26A5P58743 744 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 PMS2P3Q13401 168 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 RAB39AQ14964 217 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 CD226Q15762 336 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 WBP2NLQ6ICG8 309 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 KIRREL2Q6UWL6 708 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 LRRC69Q6ZNQ3 347 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 GTF2IRD2Q86UP8 949 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
COPS3-201ENST00000268717 PHOSPHO1Q8TCT1 267 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 SGCDQ92629 289 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 MR1Q95460 341 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 MUL1Q969V5 352 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 AKIRIN1Q9H9L7 192 aaPredicted RBP14.06□□□□□ -0.16
COPS3-201ENST00000268717 AASSQ9UDR5 926 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 SDK2Q58EX2 2172 aa14.06□□□□□ -0.16
COPS3-201ENST00000268717 A0A087WUJ7 227 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 IGHV3-20A0A0C4DH32 117 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 UNC119BA6NIH7 251 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 PIP5K1CO60331 668 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 PPM1BO75688 479 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 SEC14L2O76054 403 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 IGHEP01854 428 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 PNMTP11086 282 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 ITPKBP27987 946 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 SLC15A1P46059 708 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 GPR4P46093 362 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 RNF144AP50876 292 aaPredicted RBP14.05□□□□□ -0.16
COPS3-201ENST00000268717 TMEM44Q2T9K0 475 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 C19orf48Q6RUI8 117 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 APOOLQ6UXV4 268 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 OR2Y1Q8NGV0 311 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 GRHL3Q8TE85 626 aa14.05□□□□□ -0.16
COPS3-201ENST00000268717 FCGR1BQ92637 280 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms