RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 BRIX1Q8TDN6 353 aaKnown RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 TTC9Q92623 222 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 BPIFA2Q96DR5 249 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 PHOX2BQ99453 314 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 POLDIP3Q9BY77 421 aaKnown RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 DEFB126Q9BYW3 111 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 B3GNT4Q9C0J1 378 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 RBM38Q9H0Z9 239 aaKnown RBP14.97□□□□□ -0.01
TPM1-201ENST00000267996 IRF2BPLQ9H1B7 796 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 ATP13A2Q9NQ11 1180 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 FAM86C1Q9NVL1 165 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 FOXJ2Q9P0K8 574 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 TCFL5Q9UL49 500 aa14.97□□□□□ -0.01
TPM1-201ENST00000267996 SDK2Q58EX2 2172 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 TCN2P20062 427 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 PTNP21246 168 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 MST1P26927 711 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 FBXW4P57775 412 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 PIGFQ07326 219 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 BTBD16Q32M84 506 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 TMEM164Q5U3C3 297 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 XAF1Q6GPH4 301 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 CASP12Q6UXS9 341 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 NDUFAF7Q7L592 441 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 ATG4DQ86TL0 474 aaPredicted RBP14.96□□□□□ -0.01
TPM1-201ENST00000267996 MISPQ8IVT2 679 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 CDK20Q8IZL9 346 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 FAM26EQ8N5C1 309 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 SLC15A4Q8N697 577 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 DEFB124Q8NES8 71 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 TMIGD2Q96BF3 282 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 ZNF524Q96C55 264 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 KLHDC3Q9BQ90 382 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 DPH1Q9BZG8 443 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 SLC19A3Q9BZV2 496 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 ADAM19Q9H013 955 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 C12orf10Q9HB07 376 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 CCNB1IP1Q9NPC3 277 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 ERVK-18Q9QC07 812 aa14.96□□□□□ -0.01
TPM1-201ENST00000267996 HTR3EA5X5Y0 456 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 HCRTR2O43614 444 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 IGF2P01344 180 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 FBXO45P0C2W1 286 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 PNMTP11086 282 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 PCYT1AP49585 367 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 FXYD6P3P58550 94 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 OCLNQ16625 522 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 PPP1R32Q7Z5V6 425 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 LSRQ86X29 649 aaPredicted RBP14.95□□□□□ -0.02
TPM1-201ENST00000267996 ESX1Q8N693 406 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 TMCO5AQ8N6Q1 288 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 ZNF540Q8NDQ6 660 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 OR5W2Q8NH69 310 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 SLC22A8Q8TCC7 542 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 TMCO6Q96DC7 493 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 RHNO1Q9BSD3 238 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 TSSK6Q9BXA6 273 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 CLN6Q9NWW5 311 aa14.95□□□□□ -0.02
TPM1-201ENST00000267996 FARSAQ9Y285 508 aaKnown RBP14.95□□□□□ -0.02
TPM1-201ENST00000267996 IGKV1D-42A0A075B6H8 117 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 CLCA1A8K7I4 914 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 EFCAB9A8MZ26 197 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 KPNA4O00629 521 aaPredicted RBP14.94□□□□□ -0.02
TPM1-201ENST00000267996 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
TPM1-201ENST00000267996 PRKYO43930 277 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 PTP4A3O75365 173 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 PCMT1P22061 227 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 SLC1A3P43003 542 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TMED10P49755 219 aaKnown RBP14.94□□□□□ -0.02
TPM1-201ENST00000267996 CCR4P51679 360 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 GAS1P54826 345 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 ZBED5Q49AG3 693 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 C3orf38Q5JPI3 329 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 RPL13AP3Q6NVV1 102 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 PRSS48Q7RTY5 328 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TCEANCQ8N8B7 351 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 OR4Q3Q8NH05 313 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 GGHQ92820 318 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 NACC2Q96BF6 587 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 SH3YL1Q96HL8 342 aaPredicted RBP14.94□□□□□ -0.02
TPM1-201ENST00000267996 Q96MT0 163 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 IL4I1Q96RQ9 567 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TUBA1CQ9BQE3 449 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TMEM43Q9BTV4 400 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 FAM117AQ9C073 453 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TBC1D23Q9NUY8 699 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 TVP23BQ9NYZ1 205 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 SIGLEC7Q9Y286 467 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 SNX5Q9Y5X3 404 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 AHCTF1Q8WYP5 2266 aa14.94□□□□□ -0.02
TPM1-201ENST00000267996 RGS10O43665 173 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 SCO2O43819 266 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 OR2J2O76002 312 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 CELA2AP08217 269 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 SLC15A1P46059 708 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 P2RX1P51575 399 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 LIMK1P53667 647 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 PMS2P3Q13401 168 aa14.93□□□□□ -0.02
TPM1-201ENST00000267996 SSPNQ14714 243 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms