RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 RPS26P62854 115 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 MLLT1Q03111 559 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 SNTB1Q13884 538 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 HES5Q5TA89 166 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 PGAP1Q75T13 922 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 MRGPREQ86SM8 312 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 OR4D9Q8NGE8 314 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 THEM6Q8WUY1 208 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 NR4A3Q92570 626 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 ZNF764Q96H86 408 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 FCRL4Q96PJ5 515 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 OR1F2PQ96R84 312 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SGPP1Q9BX95 441 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 ZDHHC6Q9H6R6 413 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 PRDM9Q9NQV7 894 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SPG21Q9NZD8 308 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 HELZP42694 1942 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 PMS2P1A4D2B8 440 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 OR6C74A6NCV1 312 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 WASH3PC4AMC7 463 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SCAMP1O15126 338 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GRM6O15303 877 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 HTR3BO95264 441 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 CH25HO95992 272 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GBAP04062 536 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 CNR1P21554 472 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 CD70P32970 193 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 PTGFRP43088 359 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 STARP49675 285 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GPR143P51810 404 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 EPHB3P54753 998 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 DLX5P56178 289 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GMFBP60983 142 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 TBPL1P62380 186 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 HTRA4P83105 476 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 OC90Q02509 493 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 Q3ZCU0 254 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 CLEC12AQ5QGZ9 265 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 TNFAIP8L2Q6P589 184 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 APOOLQ6UXV4 268 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 RBMS3Q6XE24 437 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 CXXC5Q7LFL8 322 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 ELP5Q8TE02 316 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 GANCQ8TET4 914 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SGK3Q96BR1 496 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 ZNF285Q96NJ3 590 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 ADAT1Q9BUB4 502 aaKnown RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 SLC6A16Q9GZN6 736 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 MFFQ9GZY8 342 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 ENKD1Q9H0I2 346 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 TSPAN6O43657 245 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SC5DO75845 299 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SERPIND1P05546 499 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 IL3P08700 152 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 UBBP0CG47 229 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 UBCP0CG48 685 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 SAGP10523 405 aaPredicted RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 PTAFRP25105 342 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 RPS27AP62979 156 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 UBA52P62987 128 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 STX4Q12846 297 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 HENMT1Q5T8I9 393 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 AADACL4Q5VUY2 407 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ARL9Q6T311 187 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 UQCC3Q6UW78 93 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MOB3CQ70IA8 216 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 LINGO2Q7L985 606 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 TMEM150AQ86TG1 271 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 C12orf40Q86WS4 652 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ARL14EPQ8N8R7 260 aaPredicted RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 OR5M1Q8NGP8 315 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SETD7Q8WTS6 366 aaKnown RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 CXorf36Q9H7Y0 433 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ZNF334Q9HCZ1 680 aaPredicted RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 C14orf105Q9NVL8 296 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 AKAP7Q9P0M2 348 aaPredicted RBP12.18□□□□□ -0.46
NUP54-201ENST00000264883 TAAR2Q9P1P5 351 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MBD2Q9UBB5 411 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MIOXQ9UGB7 285 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 CD84Q9UIB8 345 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 FBXL3Q9UKT7 428 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 IRAK3Q9Y616 596 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SLC22A7Q9Y694 548 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 TMEM218A2RU14 115 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 OR2AG2A6NM03 316 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 M0R3H8 397 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MTX2O75431 263 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 C1orf105O95561 183 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 IL5P05113 134 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 KLK1P06870 262 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ZNF35P13682 527 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms