RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 RNPS1Q15287 305 aaKnown RBP14.35□□□□□ -0.11
USE1-201ENST00000263897 GSTA3Q16772 222 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 EXOC3L2Q2M3D2 409 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 GPAT3Q53EU6 434 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 PAMR1Q6UXH9 720 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 BEND4Q6ZU67 534 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 C22orf34Q6ZV56 151 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 FAM71CQ8NEG0 241 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 RNF128Q8TEB7 428 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 ZFP90Q8TF47 636 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 TMEM234Q8WY98 164 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 MBD6Q96DN6 1003 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 TRNT1Q96Q11 434 aaKnown RBP14.35□□□□□ -0.11
USE1-201ENST00000263897 OR52B2Q96RD2 323 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 COQ10BQ9H8M1 238 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.35□□□□□ -0.11
USE1-201ENST00000263897 ACER3Q9NUN7 267 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 LIPT1Q9Y234 373 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 SLC35A3Q9Y2D2 325 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 DEFB108AA8MXU0 73 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 UBDO15205 165 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 PRKD3O94806 890 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 H6PDO95479 791 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 AGTR1P30556 359 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ANXA11P50995 505 aaKnown RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 SYPL1Q16563 259 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ANKRD34AQ69YU3 496 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 STAC2Q6ZMT1 411 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 FCRLAQ7L513 359 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ZNF550Q7Z398 422 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ABHD3Q8WU67 409 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 MARK4Q96L34 752 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 QRSL1Q9H0R6 528 aaKnown RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 MTHFD2LQ9H903 347 aaPredicted RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 GP6Q9HCN6 339 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 FANCFQ9NPI8 374 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 SDR39U1Q9NRG7 319 aaPredicted RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 SERINC1Q9NRX5 453 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 ZIM2Q9NZV7 527 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 C6orf203Q9P0P8 240 aaPredicted RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 SETD2Q9BYW2 2564 aaPredicted RBP14.34□□□□□ -0.11
USE1-201ENST00000263897 ACANP16112 2415 aa14.34□□□□□ -0.11
USE1-201ENST00000263897 A0A1W2PNR3 127 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 RFXANKO14593 260 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 SIAH2O43255 324 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 BCAS1O75363 584 aaPredicted RBP14.33□□□□□ -0.12
USE1-201ENST00000263897 ATE1O95260 518 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 KRT75O95678 551 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 ENPP1P22413 925 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 SLC7A1P30825 629 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 MERTKQ12866 999 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 KEAP1Q14145 624 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 COX20Q5RI15 118 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 TMEM201Q5SNT2 666 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 C3orf33Q6P1S2 294 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 EPGNQ6UW88 154 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 LRRC74BQ6ZQY2 392 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 PLEKHM3Q6ZWE6 761 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 STK32CQ86UX6 486 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 TUSC5Q8IXB3 177 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 SLC43A2Q8N370 569 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 PMM1Q92871 262 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 ALPK1Q96QP1 1244 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 SLC38A1Q9H2H9 487 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 C12orf49Q9H741 205 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 SLC6A13Q9NSD5 602 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 USH1CQ9Y6N9 552 aa14.33□□□□□ -0.12
USE1-201ENST00000263897 AGAP5A6NIR3 686 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 CLDN24A6NM45 220 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 DIAPH2O60879 1101 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 YES1P07947 543 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 CHRM4P08173 479 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 ZCCHC18P0CG32 403 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 PPP3CBP16298 524 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 RYKP34925 604 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 APOBEC1P41238 236 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 MAGEA8P43361 318 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 POLR2JP52435 117 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 HPCAP84074 193 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 NUFIP2Q7Z417 695 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 HMGN2P46Q86SG4 172 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 CMIPQ8IY22 773 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 PNPT1Q8TCS8 783 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 CNOT9Q92600 299 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 PIK3IP1Q96FE7 263 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 ZC3HAV1LQ96H79 300 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 ATP6V1G3Q96LB4 118 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 C7orf26Q96N11 449 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 OR5B2Q96R09 309 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 CCDC106Q9BWC9 280 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 EXOSC3Q9NQT5 275 aaKnown RBP14.32□□□□□ -0.12
USE1-201ENST00000263897 KLHL13Q9P2N7 655 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 GPR52Q9Y2T5 361 aa14.32□□□□□ -0.12
USE1-201ENST00000263897 ARID1AO14497 2285 aa14.31□□□□□ -0.12
USE1-201ENST00000263897 IGHV3-15A0A0B4J1V0 119 aa14.31□□□□□ -0.12
USE1-201ENST00000263897 TGDSO95455 350 aa14.31□□□□□ -0.12
USE1-201ENST00000263897 THBDP07204 575 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms