RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CNIH4Q9P003 139 aa20.67■□□□□ 0.9
UFD1-201ENST00000263202 POLHQ9Y253 713 aa20.67■□□□□ 0.9
UFD1-201ENST00000263202 POFUT2Q9Y2G5 429 aa20.67■□□□□ 0.9
UFD1-201ENST00000263202 KLK10O43240 276 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 PTNP21246 168 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 CYB561P49447 251 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 SUMO3P55854 103 aaPredicted RBP20.66■□□□□ 0.9
UFD1-201ENST00000263202 SLC36A3Q495N2 470 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 ZNF227Q86WZ6 799 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 SELENONQ9NZV5 590 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 MED11Q9P086 117 aa20.66■□□□□ 0.9
UFD1-201ENST00000263202 ANKUB1A6NFN9 424 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 PIP5K1CO60331 668 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 MSX1P28360 303 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 SLC1A3P43003 542 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 OMPP47874 163 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 UGT2B15P54855 530 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 ADARB1P78563 741 aaKnown RBP20.65■□□□□ 0.9
UFD1-201ENST00000263202 KCNAB2Q13303 367 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 CMPK2Q5EBM0 449 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 RNF113BQ8IZP6 322 aaKnown RBP20.65■□□□□ 0.9
UFD1-201ENST00000263202 SNIP1Q8TAD8 396 aaKnown RBP20.65■□□□□ 0.9
UFD1-201ENST00000263202 CYGBQ8WWM9 190 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 HS6ST2Q96MM7 605 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 CCNL2Q96S94 520 aaPredicted RBP20.65■□□□□ 0.9
UFD1-201ENST00000263202 DPH1Q9BZG8 443 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 ADAM19Q9H013 955 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 ABI3Q9P2A4 366 aa20.65■□□□□ 0.9
UFD1-201ENST00000263202 A0A087WUJ7 227 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 ANKRD33BA6NCL7 494 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 DENRO43583 198 aaKnown RBP20.64■□□□□ 0.9
UFD1-201ENST00000263202 POLR2IP36954 125 aaKnown RBP20.64■□□□□ 0.9
UFD1-201ENST00000263202 IFNGR2P38484 337 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 CAPGP40121 348 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 RBM34P42696 430 aaKnown RBP20.64■□□□□ 0.9
UFD1-201ENST00000263202 QPRTQ15274 297 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 INPP5JQ15735 1006 aaPredicted RBP20.64■□□□□ 0.9
UFD1-201ENST00000263202 KLHL17Q6TDP4 642 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 ATG4DQ86TL0 474 aaPredicted RBP20.64■□□□□ 0.9
UFD1-201ENST00000263202 NRMQ8IXM6 262 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 PIGXQ8TBF5 258 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 GPA33Q99795 319 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 Q9H521 79 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 FAM118AQ9NWS6 357 aa20.64■□□□□ 0.9
UFD1-201ENST00000263202 A6NL46 340 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 H0YAE9 185 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 CDH2P19022 906 aaPredicted RBP20.64■□□□□ 0.89
UFD1-201ENST00000263202 CD96P40200 585 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 OC90Q02509 493 aaPredicted RBP20.64■□□□□ 0.89
UFD1-201ENST00000263202 RAPSNQ13702 412 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 WLSQ5T9L3 541 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 WDSUB1Q8N9V3 476 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 PFN4Q8NHR9 129 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 GABARAPL3Q9BY60 117 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 UCK2Q9BZX2 261 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 DSN1Q9H410 356 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 RIBC2Q9H4K1 309 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 HHATLQ9HCP6 504 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 TAS2R10Q9NYW0 307 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 LRCH1Q9Y2L9 728 aa20.64■□□□□ 0.89
UFD1-201ENST00000263202 CDC40O60508 579 aaKnown RBP eCLIP20.63■□□□□ 0.89
UFD1-201ENST00000263202 GP1BBP13224 206 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 TUBA3CQ13748 450 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 TUBA3EQ6PEY2 450 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 LINC00696Q6ZRV3 163 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 MEX3DQ86XN8 651 aaKnown RBP20.63■□□□□ 0.89
UFD1-201ENST00000263202 PARP8Q8N3A8 854 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 OR2M3Q8NG83 312 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 GNPDA2Q8TDQ7 276 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 FAM46AQ96IP4 442 aaKnown RBP20.63■□□□□ 0.89
UFD1-201ENST00000263202 C12orf10Q9HB07 376 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 MEPEQ9NQ76 525 aaPredicted RBP20.63■□□□□ 0.89
UFD1-201ENST00000263202 GPR83Q9NYM4 423 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 LRFN1Q9P244 771 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 MED31Q9Y3C7 131 aa20.63■□□□□ 0.89
UFD1-201ENST00000263202 ASPMQ8IZT6 3477 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 GNB5O14775 395 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 F10P00742 488 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 P04436 131 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 PNMTP11086 282 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 TACR3P29371 465 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 CASRP41180 1078 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 NPRL3Q12980 569 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 AGAP7PQ5VUJ5 663 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 TTC33Q6PID6 262 aaPredicted RBP20.62■□□□□ 0.89
UFD1-201ENST00000263202 CD300LDQ6UXZ3 194 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 FADS6Q8N9I5 356 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 PSD4Q8NDX1 1056 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 AGAP4Q96P64 663 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 UTP23Q9BRU9 249 aaKnown RBP20.62■□□□□ 0.89
UFD1-201ENST00000263202 ANKRD60Q9BZ19 345 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 GRIP2Q9C0E4 1043 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 SACM1LQ9NTJ5 587 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 REV1Q9UBZ9 1251 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 SPTBN2O15020 2390 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 ELOA3DA6NLF2 546 aaPredicted RBP20.62■□□□□ 0.89
UFD1-201ENST00000263202 WDPCPO95876 746 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 GNAO1P09471 354 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 ID4P47928 161 aa20.62■□□□□ 0.89
UFD1-201ENST00000263202 GSSP48637 474 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms