RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ACTR1AP61163 376 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 SHC2P98077 582 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 RPL6Q02878 288 aaKnown RBP8.45□□□□□ -1.06
MSH4-201ENST00000263187 FAM109BQ6ICB4 259 aaPredicted RBP8.45□□□□□ -1.06
MSH4-201ENST00000263187 TMEM64Q6YI46 380 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TCTE3Q8IZS6 198 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 SLC44A3Q8N4M1 653 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 DUSP18Q8NEJ0 188 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OR5M3Q8NGP4 307 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OR6K6Q8NGW6 343 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 DERL3Q96Q80 235 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OR14A2Q96R54 314 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 NDC1Q9BTX1 674 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 MEPEQ9NQ76 525 aaPredicted RBP8.45□□□□□ -1.06
MSH4-201ENST00000263187 CACNG2Q9Y698 323 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TEX13CA0A0J9YWL9 993 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 CHP2O43745 196 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 FGF17O60258 216 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ICMTO60725 284 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 NOS1APO75052 506 aaPredicted RBP8.45□□□□□ -1.06
MSH4-201ENST00000263187 IGHA1P01876 353 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 HRGP04196 525 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 HMGN1P05114 100 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 CT62P0C5K7 136 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 IGFALSP35858 605 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ATP12AP54707 1039 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 P2RX3P56373 397 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 PPP1CAP62136 330 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 PPP2CBP62714 309 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 PPP2CAP67775 309 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 DCST2Q5T1A1 773 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 FBXO42Q6P3S6 717 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TRILQ7L0X0 811 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OAFQ86UD1 273 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ZNF687Q8N1G0 1237 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TOMM5Q8N4H5 51 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 GATSQ8NAP1 163 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TTLQ8NG68 377 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OR4C6Q8NH72 309 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ZNRF4Q8WWF5 429 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 KCNJ15Q99712 375 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TMEM106CQ9BVX2 250 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 C1QTNF2Q9BXJ5 285 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 SLC17A9Q9BYT1 436 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TMEM168Q9H0V1 697 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 KCNN2Q9H2S1 579 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 KLHL21Q9UJP4 597 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 GNG8Q9UK08 70 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ADAM30Q9UKF2 790 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 TMEM5Q9Y2B1 443 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 EXOGQ9Y2C4 368 aaKnown RBP8.45□□□□□ -1.06
MSH4-201ENST00000263187 PTPRSQ13332 1948 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ACOD1A6NK06 481 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 RPP14O95059 124 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 FGF19O95750 216 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ATF1P18846 271 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ENPP1P22413 925 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 PRKAR1BP31321 381 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 TRA2BP62995 288 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 CRYZQ08257 329 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 ERV3-1Q14264 604 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 HBMQ6B0K9 141 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 DGAT2L6Q6ZPD8 337 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ASPGQ86U10 573 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RANBP3LQ86VV4 465 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 OR52N1Q8NH53 320 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SFXN5Q8TD22 340 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 KISS1RQ969F8 398 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 TRIM63Q969Q1 353 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 CLIP3Q96DZ5 547 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 MS4A4EQ96PG1 132 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ERMAPQ96PL5 475 aaPredicted RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 CACNG6Q9BXT2 260 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 HDAC8Q9BY41 377 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 ASCC3Q8N3C0 2202 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 TRAPPC13A5PLN9 417 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 OR6C74A6NCV1 312 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 FAM86C2PA6NEL3 165 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 HRKO00198 91 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SYT5O00445 386 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 BHLHE40O14503 412 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SEC14L5O43304 696 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 KLF4O43474 513 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 HCRTR1O43613 425 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SLC43A1O75387 559 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 MT-ND5P03915 603 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SLC35G6P0C7Q6 338 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 AHCYP23526 432 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 SLC6A1P30531 599 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 BMP8BP34820 402 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 BTCP35070 178 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 THBS2P35442 1172 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 RPS27P42677 84 aaKnown RBP8.44□□□□□ -1.06
MSH4-201ENST00000263187 ZNF85Q03923 595 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 FAAH2Q6GMR7 532 aa8.44□□□□□ -1.06
MSH4-201ENST00000263187 BMP8AQ7Z5Y6 402 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms