RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 C20orf141Q9NUB4 165 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 TMEM5Q9Y2B1 443 aa20.89■□□□□ 0.94
SMARCB1-201ENST00000263121 H3BN98 237 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 SERPINA7P05543 415 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 POU1F1P28069 291 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 PTGDSP41222 190 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 CDK5R2Q13319 367 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 C6orf141Q5SZD1 244 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 SLX4IPQ5VYV7 408 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 TMEM236Q5W0B7 351 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 FCRLBQ6BAA4 426 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 H3F3CQ6NXT2 135 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 OPN5Q6U736 354 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 ATG4DQ86TL0 474 aaPredicted RBP20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 ENTHD1Q8IYW4 607 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 FAM81AQ8TBF8 368 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 DUSP19Q8WTR2 217 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 DSN1Q9H410 356 aa20.89■□□□□ 0.93
SMARCB1-201ENST00000263121 CDC42EP2O14613 210 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 DXOO77932 396 aaKnown RBP20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 IFI30P13284 250 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 PGCP20142 388 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 MAKP20794 623 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 SLC1A3P43003 542 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 SSR4P51571 173 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 C17orf67Q0P5P2 114 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 ATP1A4Q13733 1029 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 CBFBQ13951 182 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 TMPRSS11FQ6ZWK6 438 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 B4GALNT2Q8NHY0 566 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 CNIH3Q8TBE1 160 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 UBE2FQ969M7 185 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 ADAM19Q9H013 955 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 C12orf10Q9HB07 376 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 ATP13A2Q9NQ11 1180 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 RNF6Q9Y252 685 aa20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 RIF1Q5UIP0 2472 aaKnown RBP20.88■□□□□ 0.93
SMARCB1-201ENST00000263121 KPNA4O00629 521 aaPredicted RBP20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 PNMTP11086 282 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 RBM48Q5RL73 367 aaKnown RBP20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 BICRALQ6AI39 1079 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 DND1Q8IYX4 353 aaKnown RBP20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 DEPDC4Q8N2C3 294 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 ZNF563Q8TA94 476 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 BPIFA2Q96DR5 249 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 PLA2G12AQ9BZM1 189 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 EGLN3Q9H6Z9 239 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 GALNT9Q9HCQ5 603 aa20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 CHCHD2Q9Y6H1 151 aaPredicted RBP20.87■□□□□ 0.93
SMARCB1-201ENST00000263121 ITPKBP27987 946 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 APOFQ13790 326 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 TOMM34Q15785 309 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 COL28A1Q2UY09 1125 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 C12orf73Q69YU5 71 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 TMEM81Q6P7N7 255 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 ZNF620Q6ZNG0 422 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 CLDN22Q8N7P3 220 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 GPR119Q8TDV5 335 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 ASB15Q8WXK1 588 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 IP6K3Q96PC2 410 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 DPH1Q9BZG8 443 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 GPN2Q9H9Y4 310 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 ZNF226Q9NYT6 803 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 KLRF1Q9NZS2 232 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 GVINP1Q7Z2Y8 2422 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 B4DXG7 233 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 TP53I11O14683 189 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 GMFGO60234 142 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 GABRB1P18505 474 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 SUMO3P55854 103 aaPredicted RBP20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 CDC42P60953 191 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 CDK5Q00535 292 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 BROXQ5VW32 411 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 CDK20Q8IZL9 346 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 OR8D4Q8NGM9 314 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 RHOXF1Q8NHV9 184 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 APH1BQ8WW43 257 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 ZNF566Q969W8 418 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 SECISBP2Q96T21 854 aaKnown RBP20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 SLC19A3Q9BZV2 496 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 METTL7AQ9H8H3 244 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 SLC25A19Q9HC21 320 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 RASSF1Q9NS23 344 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 IL20Q9NYY1 176 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 AASSQ9UDR5 926 aa20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 CDV3Q9UKY7 258 aaKnown RBP20.86■□□□□ 0.93
SMARCB1-201ENST00000263121 IGKV1D-42A0A075B6H8 117 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 IGLV3-32A0A0A0MS00 114 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 UNC119BA6NIH7 251 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 ELOA3DA6NLF2 546 aaPredicted RBP20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 GNB5O14775 395 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 WBP4O75554 376 aaKnown RBP20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 CRHBPP24387 322 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 CASP3P42574 277 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 TOP3AQ13472 1001 aaPredicted RBP20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 TGIF1Q15583 401 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 ELOA3BQ3SY89 546 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 IL20RBQ6UXL0 311 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 P3H2Q8IVL5 708 aa20.85■□□□□ 0.93
SMARCB1-201ENST00000263121 TSPAN14Q8NG11 270 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms