RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 VSX1Q9NZR4 365 aaPredicted RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ENPP4Q9Y6X5 453 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 SERINC4A6NH21 518 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TARM1B6A8C7 271 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CBFA2T3O75081 653 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 GJB3O75712 270 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CDK2P24941 298 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ADRA1AP35348 466 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ART1P52961 327 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 GRK1Q15835 563 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 KHDC1Q4VXA5 237 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TMEM244Q5VVB8 128 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 AFMIDQ63HM1 303 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 RTL6Q6ICC9 239 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 PAQR9Q6ZVX9 377 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ASB17Q8WXJ9 295 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 PRRC1Q96M27 445 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 OPA3Q9H6K4 179 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 C14orf119Q9NWQ9 140 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 USP36Q9P275 1121 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 LRRC42Q9Y546 428 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TSPAN12O95859 305 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 HTR6P50406 440 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TUBA3EQ6PEY2 450 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 BTLAQ7Z6A9 289 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 ENDOVQ8N8Q3 282 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CSNK2A3Q8NEV1 391 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TMED7-TICAM2A0A0A6YYA0 188 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 FAM189A1O60320 539 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CRYBA1P05813 215 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 CXADRP78310 365 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 LTB4RQ15722 352 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TMEM211Q6ICI0 200 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TMEM207Q6UWW9 146 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 METTL4Q8N3J2 472 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 MS4A15Q8N5U1 240 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 PDLIM5Q96HC4 596 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC41A2Q96JW4 573 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 TMED7Q9Y3B3 224 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 DNAJC15Q9Y5T4 150 aa12.67□□□□□ -0.38
PDGFRB-201ENST00000261799 SSC5DA1L4H1 1573 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC16A7O60669 478 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SNAPC5O75971 98 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 MAOAP21397 527 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 CHMP24386 653 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 XKRXQ6PP77 449 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ASRGL1Q7L266 308 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 PM20D2Q8IYS1 436 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SDR9C7Q8NEX9 313 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 QPCTLQ9NXS2 382 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 RABL2AQ9UBK7 228 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 RABL2BQ9UNT1 228 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 TRAV36DV7A0A075B6V5 113 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 IFNA1P01562 189 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 GNAO1P09471 354 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ATXN1LP0C7T5 689 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 TSFMP43897 325 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 GNB2P62879 340 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ARF1P84077 181 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 MED25Q71SY5 747 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ZDHHC16Q969W1 377 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 PKP2Q99959 881 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SDHAF2Q9NX18 166 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 LRFN1Q9P244 771 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 STEAP1Q9UHE8 339 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 H0Y8X5 98 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 TSPAN9O75954 239 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 OSMP13725 252 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ETS2P15036 469 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 PCBP4P57723 403 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 PSMA6P60900 246 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 KCNJ8Q15842 424 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 CCNJQ5T5M9 372 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 FAM57BQ71RH2 274 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ARHGAP22Q7Z5H3 698 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 OR4K15Q8NH41 348 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 BPIFA2Q96DR5 249 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 LYRM4Q9HD34 91 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 HAO2Q9NYQ3 351 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 OR6C70A6NIJ9 312 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 M0R1B8 84 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 S100A6P06703 90 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 ZBED5Q49AG3 693 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 CLEC14AQ86T13 490 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 LSM14AQ8ND56 463 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 TP53TG5Q9Y2B4 290 aa12.66□□□□□ -0.38
PDGFRB-201ENST00000261799 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
PDGFRB-201ENST00000261799 DLGAP1O14490 977 aa12.65□□□□□ -0.38
PDGFRB-201ENST00000261799 CD53P19397 219 aa12.65□□□□□ -0.38
PDGFRB-201ENST00000261799 TACR3P29371 465 aa12.65□□□□□ -0.38
PDGFRB-201ENST00000261799 MAP4K2Q12851 820 aa12.65□□□□□ -0.38
PDGFRB-201ENST00000261799 SLC22A25Q6T423 547 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms