RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 EVI2BP34910 448 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ACVR1BP36896 505 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 CRMP1Q14194 572 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 PRICKLE4Q2TBC4 344 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 TMEM196Q5HYL7 178 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 BICRALQ6AI39 1079 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ZNF613Q6PF04 617 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 RPTNQ6XPR3 784 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 DNAJC5GQ8N7S2 189 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 DEDD2Q8WXF8 326 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 PGLYRP3Q96LB9 341 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 TWSG1Q9GZX9 223 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 TMEM168Q9H0V1 697 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 IL21RQ9HBE5 538 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 TMEM27Q9HBJ8 222 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 MAT2BQ9NZL9 334 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 USP36Q9P275 1121 aaKnown RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.15
DDX56-201ENST00000258772 GXYLT2A0PJZ3 443 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 SYNDIG1LA6NDD5 238 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 SLC9B1P1A6NJY1 282 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 GRXCR1A8MXD5 290 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 SMLR1H3BR10 107 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 PEX14O75381 377 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 CA3P07451 260 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 CT62P0C5K7 136 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 TNFRSF4P43489 277 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 POU6F2P78424 691 aaPredicted RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 MGAT2Q10469 447 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 SLC25A35Q3KQZ1 300 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ACSM3Q53FZ2 586 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 SLC44A3Q8N4M1 653 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 OR10G6Q8NH81 332 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 GRHL3Q8TE85 626 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ZNF559Q9BR84 538 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 HAO2Q9NYQ3 351 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ACTR10Q9NZ32 417 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ATG2AQ2TAZ0 1938 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 H0YGG7 62 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 CYR61O00622 381 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 EEF1E1O43324 174 aaKnown RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 AKR7A2O43488 359 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 FZD7O75084 574 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 PPP1R3DO95685 299 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 AK1P00568 194 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ZNF3P17036 446 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 HK1P19367 917 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 DRD5P21918 477 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 NTSR1P30989 418 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ARF3P61204 181 aaPredicted RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 DNAH14Q0VDD8 3507 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 DMKNQ6E0U4 476 aaPredicted RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 FAAH2Q6GMR7 532 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 LAMTOR1Q6IAA8 161 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ZAR1Q86SH2 424 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 OR5T3Q8NGG3 340 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 TRMT10AQ8TBZ6 339 aaKnown RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 SLC2A12Q8TD20 617 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 CNOT9Q92600 299 aaKnown RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 PMM1Q92871 262 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 TNFRSF13CQ96RJ3 184 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 ZFYVE21Q9BQ24 234 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 RPP25Q9BUL9 199 aaKnown RBP14.08□□□□□ -0.16
DDX56-201ENST00000258772 CERS4Q9HA82 394 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 C14orf105Q9NVL8 296 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 FBXL21Q9UKT6 434 aa14.08□□□□□ -0.16
DDX56-201ENST00000258772 A0A0B4J2E0 115 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 A0A1B0GX12 115 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 OR6C74A6NCV1 312 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 OR2B3O76000 313 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 GYPBP06028 91 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 PEPDP12955 493 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 PYCR1P32322 319 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 BTCP35070 178 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 GNG2P59768 71 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
DDX56-201ENST00000258772 NFATC4Q14934 902 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 BTBD16Q32M84 506 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 PYHIN1Q6K0P9 492 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 MAMSTRQ6ZN01 415 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 RTL4Q6ZR62 310 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 CADM2Q8N3J6 435 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 MS4A15Q8N5U1 240 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 TEX19Q8NA77 164 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 OR5J2Q8NH18 312 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 GHSRQ92847 366 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 PEX11GQ96HA9 241 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 WDR92Q96MX6 357 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX56-201ENST00000258772 KLHL1Q9NR64 748 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 FLRT3Q9NZU0 649 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 BAIAP2Q9UQB8 552 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 CACNG2Q9Y698 323 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 SPACA6W5XKT8 324 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 A0A0A6YYJ9 748 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 A6NCN8 305 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 CHP2O43745 196 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 SOX30O94993 753 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 NRG3P56975 720 aa14.07□□□□□ -0.16
DDX56-201ENST00000258772 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms