RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 RNF113BQ8IZP6 322 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF461Q8TAF7 563 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ISG20Q96AZ6 181 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PEX11GQ96HA9 241 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SYT17Q9BSW7 474 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF426Q9BUY5 554 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SMIM3Q9BZL3 60 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IL22Q9GZX6 179 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ENY2Q9NPA8 101 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 NDRG2Q9UN36 371 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 LSM5Q9Y4Y9 91 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 A0A0G2JLL6 359 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 LOC285095A0A1B0GVY8 99 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IRAK2O43187 625 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IFNA5P01569 189 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 HIST1H1BP16401 226 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ITGB5P18084 799 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 S1PR1P21453 382 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 POLR2HP52434 150 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 GAMTQ14353 236 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CNN3Q15417 329 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 C18orf63Q68DL7 685 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM71Q6P5X7 295 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ARL9Q6T311 187 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ZNF783Q6ZMS7 281 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CLDN22Q8N7P3 220 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 KCTD12Q96CX2 325 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TBX5Q99593 518 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 GPR87Q9BY21 358 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SEC11CQ9BY50 192 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ISYNA1Q9NPH2 558 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SIPA1L3O60292 1781 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 A0A1W2PS29 197 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PFKLP17858 780 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 AVPR1BP47901 424 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CDKN1CP49918 316 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TAS2R41P59536 307 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ECH1Q13011 328 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PLA1AQ53H76 456 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ESRP1Q6NXG1 681 aaKnown RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 DPY19L4Q7Z388 723 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OAFQ86UD1 273 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR5B17Q8NGF7 314 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CIB3Q96Q77 187 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 FNDC11Q9BVV2 318 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TMEM106CQ9BVX2 250 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 MS4A12Q9NXJ0 267 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SH2B3Q9UQQ2 575 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 URGCP-MRPS24S4R325 110 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 TIAM2Q8IVF5 1701 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 UMAD1C9J7I0 102 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PIP5K1BO14986 540 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SH3BGRLO75368 114 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ARL6IP5O75915 188 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2F2O95006 317 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 YIF1AO95070 293 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 IGHEP01854 428 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 APOC2P02655 101 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 HSD17B1P14061 328 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 MGAT1P26572 445 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 ARRB1P49407 418 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SLAQ13239 276 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2F1Q13607 317 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 LANCL3Q6ZV70 420 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR13G1Q8NGZ3 307 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 OR2AE1Q8NHA4 323 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PGAM5Q96HS1 289 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 RNF170Q96K19 258 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 KLHL15Q96M94 604 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 GPA33Q99795 319 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 CPPED1Q9BRF8 314 aaPredicted RBP6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 SLCO5A1Q9H2Y9 848 aa6.34□□□□□ -1.39
PDGFRA-201ENST00000257290 PPP5D1E7EU14 171 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 H7BYZ3 331 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 CH25HO95992 272 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 TTRP02766 147 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 C4BPAP04003 597 aaKnown RBP6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 SOD2P04179 222 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 AKT2P31751 481 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 OTX2P32243 289 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 CHI3L1P36222 383 aaPredicted RBP6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 ADCYAP1R1P41586 468 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 FOXK1P85037 733 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 MBTPS1Q14703 1052 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 HEPACAMQ14CZ8 416 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 AMHR2Q16671 573 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF697Q5TEC3 545 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 GPR157Q5UAW9 335 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 RGMBQ6NW40 437 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 GDPD4Q6W3E5 623 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 Q6ZN92 141 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 FRRS1Q6ZNA5 592 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM24BQ8N5W8 94 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 SPPL2BQ8TCT7 592 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 CLEC4DQ8WXI8 215 aa6.34□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM169Q96HH4 297 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms