RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MEIKINA0A087WXM9 373 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 LOC102723532A0A0G2JNH3 316 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 EDDM13A0A1B0GTR0 161 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF749O43361 778 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 HIST1H2ABP04908 130 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CD1AP06126 327 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CALCBP10092 127 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CLUP10909 449 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 NAT2P11245 290 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TYRP1P17643 537 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 EDNRAP25101 427 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PDHA2P29803 388 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SLC6A1P30531 599 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MAT2AP31153 395 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 DRD3P35462 400 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GPR143P51810 404 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 LIM2P55344 173 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 RACK1P63244 317 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CYCSP99999 105 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 REEP5Q00765 189 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CD300CQ08708 224 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 LPAL2Q16609 132 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TOR2AQ5JU69 321 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SLC35D3Q5M8T2 416 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 HIST3H2AQ7L7L0 130 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 JAZF1Q86VZ6 243 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 BPHLQ86WA6 291 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GRAMD2AQ8IUY3 354 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 HORMAD2Q8N7B1 307 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 OR51G2Q8NGK0 314 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 LHFPL5Q8TAF8 219 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 AUTS2Q8WXX7 1259 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 HIST1H2ACQ93077 130 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 NEIL2Q969S2 332 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 RNF166Q96A37 237 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ARRDC3Q96B67 414 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 RBM18Q96H35 190 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MS4A4EQ96PG1 132 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TREX2Q9BQ50 279 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SLC25A32Q9H2D1 315 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GAREM1Q9H706 876 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 WDR26Q9H7D7 661 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MRPS30Q9NP92 439 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF69Q9UC07 566 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ELF5Q9UKW6 265 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PLCL2Q9UPR0 1127 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 LAMA1P25391 3075 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GABARAPH6UMI1 98 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 K7ESM1 405 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 AQP8O94778 261 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 RLN1P04808 185 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SYPP08247 313 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 IFNGR1P15260 489 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 AHRP35869 848 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 B3GNTL1Q67FW5 361 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SEZ6L2Q6UXD5 910 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 OTOP2Q7RTS6 562 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PAQR7Q86WK9 346 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SFTPA1Q8IWL2 248 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 INO80EQ8NBZ0 244 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MORN4Q8NDC4 146 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 IRF7Q92985 503 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 NXPE3Q969Y0 559 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 GIMAP5Q96F15 307 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 FERD3LQ96RJ6 166 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MS4A8Q9BY19 250 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MFRPQ9BY79 579 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CUEDC1Q9NWM3 386 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SLC39A1Q9NY26 324 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PLEKHB1Q9UF11 243 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 A0A0A6YYD5 115 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MEGF11A6BM72 1044 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CD8B2A6NJW9 211 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 DISC1C4P0D8 188 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PRRT4C9JH25 899 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 F5H5P2 479 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 J3QLW9 94 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 B3GALT2O43825 422 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CDC40O60508 579 aaKnown RBP eCLIP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 PRAMEF2O60811 474 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 THY1P04216 161 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 THBS1P07996 1170 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 OR2T7P0C7T2 308 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 CD8BP10966 210 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF19P17023 458 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 RPL4P36578 427 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TPMTP51580 245 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 SNRPD2P62316 118 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MPPED2Q15777 294 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 ZNF79Q15937 498 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM31Q5JXX7 168 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM69Q5SWH9 247 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TCTN3Q6NUS6 607 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 TMEM107Q6UX40 140 aa3.86□□□□□ -1.79
UBE4A-201ENST00000252108 MRPL43Q8N983 215 aaKnown RBP3.86□□□□□ -1.79
UBE4A-201ENST00000252108 NUP43Q8NFH3 380 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms