RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 HIDE1A8MVS5 230 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 DBHP09172 617 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 RPS15AP62244 130 aaKnown RBP13.02□□□□□ -0.32
TARDBP-201ENST00000240185 OR2G6Q5TZ20 316 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 ZNF322Q6U7Q0 402 aaPredicted RBP13.02□□□□□ -0.32
TARDBP-201ENST00000240185 FJX1Q86VR8 437 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 CPNE4Q96A23 557 aaPredicted RBP13.02□□□□□ -0.32
TARDBP-201ENST00000240185 GORASP2Q9H8Y8 452 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 VSX1Q9NZR4 365 aaPredicted RBP13.02□□□□□ -0.32
TARDBP-201ENST00000240185 RPH3ALQ9UNE2 315 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 NID2Q14112 1375 aa13.02□□□□□ -0.32
TARDBP-201ENST00000240185 LRP5LA4QPB2 252 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 FAM221BA6H8Z2 402 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 FAM183AA6NL82 134 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 APEX1P27695 318 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 MSMO1Q15800 293 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 LETMD1Q6P1Q0 360 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 SERPINA11Q86U17 422 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 LIX1LQ8IVB5 337 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 DDIT4LQ96D03 193 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 HRH3Q9Y5N1 445 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 CPNE6O95741 557 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 TCRBP04435 133 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 FGF4P08620 206 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 GPX3P22352 226 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 CPT2P23786 658 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 DHPSP49366 369 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 RTL6Q6ICC9 239 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 MFSD6LQ8IWD5 586 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 CELF5Q8N6W0 485 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 PPP1R35Q8TAP8 253 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 TMEM163Q8TC26 289 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ST8SIA4Q92187 359 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 EMC7Q9NPA0 242 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 OSGIN2Q9Y236 505 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 MYH10P35580 1976 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 SNRPBP14678 240 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 BCKDHBP21953 392 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 TSFMP43897 325 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 UBE2NP61088 152 aaKnown RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ZNF91Q05481 1191 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 RAB35Q15286 201 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ATPAF1Q5TC12 328 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ZNF836Q6ZNA1 936 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 ABHD12BQ7Z5M8 362 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 OR4F15Q8NGB8 312 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 SCARB1Q8WTV0 552 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
TARDBP-201ENST00000240185 INPP5EQ9NRR6 644 aa13.02□□□□□ -0.33
TARDBP-201ENST00000240185 CDHR4A6H8M9 788 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 B4DXG7 233 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 H7C1Q1 480 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 YY2O15391 372 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 GPR32O75388 356 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 DFFBO76075 338 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 LAP3P28838 519 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 IMPA1P29218 277 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 EFNA3P52797 238 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 TESK1Q15569 626 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 VAMP3Q15836 100 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 UMODL1-AS1Q8N2C9 162 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 TSSK2Q96PF2 358 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 HOXD1Q9GZZ0 328 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 INIPQ9NRY2 104 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 IGSF5Q9NSI5 407 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 GRXCR2A6NFK2 248 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 MBP02144 154 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 MT-ND4LP03901 98 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FUCA1P04066 466 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ACP2P11117 423 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 HOXB2P14652 356 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 IVDP26440 423 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FOXK1P85037 733 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 TNFRSF17Q02223 184 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ZNF805Q5CZA5 627 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ZNF574Q6ZN55 896 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-201ENST00000240185 MR1Q95460 341 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 C1QTNF2Q9BXJ5 285 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 FKRPQ9H9S5 495 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 HLA-HP01893 362 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 GM2AP17900 193 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 TAS2R46P59540 309 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 AAK1Q2M2I8 961 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 MRPL21Q7Z2W9 205 aaKnown RBP13.01□□□□□ -0.33
TARDBP-201ENST00000240185 OR9K2Q8NGE7 335 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 ADAMTS16Q8TE57 1224 aa13.01□□□□□ -0.33
TARDBP-201ENST00000240185 GSTO2Q9H4Y5 243 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms