RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 OR1Q1Q15612 314 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 EXT1Q16394 746 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 TMEM201Q5SNT2 666 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 PRAMEF17Q5VTA0 474 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 FNDC7Q5VTL7 733 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 MEDAGQ5VYS4 303 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CASP12Q6UXS9 341 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 ZER1Q7Z7L7 766 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 SLC38A9Q8NBW4 561 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 NFAM1Q8NET5 270 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-201ENST00000238688 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 FCGR1BQ92637 280 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 NXF5Q9H1B4 397 aaKnown RBP12.11□□□□□ -0.47
SLIRP-201ENST00000238688 DUSP21Q9H596 190 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 RLIMQ9NVW2 624 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
SLIRP-201ENST00000238688 RHCGQ9UBD6 479 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 REV1Q9UBZ9 1251 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 DTX4Q9Y2E6 619 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 SNX5Q9Y5X3 404 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 HEATR5AQ86XA9 2040 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 MYOCOSA0A1B0GUC4 107 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 IRGMA1A4Y4 181 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 KLF4O43474 513 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TSPAN2O60636 221 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TPST2O60704 377 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 PPM1BO75688 479 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 SEC24DO94855 1032 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-201ENST00000238688 IGKV1D-16P01601 117 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 UBL4AP11441 157 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 MMP11P24347 488 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 OMPP47874 163 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 SUMO3P55854 103 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-201ENST00000238688 RNF4P78317 190 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 PLCXD2Q0VAA5 305 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 NCF4Q15080 339 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 DEFB109BQ30KR1 87 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 C12orf73Q69YU5 71 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TMPRSS11FQ6ZWK6 438 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 MRGPREQ86SM8 312 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 C9orf40Q8IXQ3 194 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 FAM81AQ8TBF8 368 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TEX47Q8TBZ9 253 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 CT55Q8WUE5 264 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TMEM239Q8WW34 195 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 GTPBP3Q969Y2 492 aaKnown RBP12.1□□□□□ -0.47
SLIRP-201ENST00000238688 DGCR14Q96DF8 476 aaKnown RBP12.1□□□□□ -0.47
SLIRP-201ENST00000238688 LAT2Q9GZY6 243 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 SOX17Q9H6I2 414 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-201ENST00000238688 IL20Q9NYY1 176 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 RPS6KB2Q9UBS0 482 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 TUBD1Q9UJT1 453 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 BAIAP2Q9UQB8 552 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 MED31Q9Y3C7 131 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 PCDHGB5Q9Y5G0 923 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 PCSK5Q92824 1860 aa12.1□□□□□ -0.47
SLIRP-201ENST00000238688 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 EFCAB10A6NFE3 127 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF264O43296 627 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 ZFAND5O76080 213 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 RCBTB2O95199 551 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 UTS2O95399 124 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 HMGN1P05114 100 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PIPP12273 146 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 CYP4B1P13584 511 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 TCN2P20062 427 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 EEF1B2P24534 225 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 POLR2IP36954 125 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 ACAA2P42765 397 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC9A3P48764 834 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC26A5P58743 744 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC35A2P78381 396 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PRKCDQ05655 676 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 DNASE1L3Q13609 305 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 WBP2NLQ6ICG8 309 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC27A4Q6P1M0 643 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PAPD4Q6PIY7 484 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 FAM198BQ6UWH4 519 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 C5orf46Q6UWT4 87 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PRSS48Q7RTY5 328 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 PRICKLE2Q7Z3G6 844 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 ENTHD1Q8IYW4 607 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 APCDD1LQ8NCL9 501 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 OR4N2Q8NGD1 307 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF420Q8TAQ5 688 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 BRIX1Q8TDN6 353 aaKnown RBP12.09□□□□□ -0.47
SLIRP-201ENST00000238688 SLC38A2Q96QD8 506 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 NODALQ96S42 347 aa12.09□□□□□ -0.47
SLIRP-201ENST00000238688 WFDC6Q9BQY6 131 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms