RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GPR4P46093 362 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 TNFRSF17Q02223 184 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ZNF630Q2M218 657 aaPredicted RBP10.46□□□□□ -0.74
MSH6-201ENST00000234420 WDR74Q6RFH5 385 aaPredicted RBP10.46□□□□□ -0.74
MSH6-201ENST00000234420 CMTM1Q8IZ96 169 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 SEC22AQ96IW7 307 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 A0A0D9SG52 128 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 UNC119BA6NIH7 251 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 CHEK1O14757 476 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 MATN3O15232 486 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 NFYBP25208 207 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 HLA-DMAP28067 261 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 XCR1P46094 333 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 MTNR1AP48039 350 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 SIM1P81133 766 aaPredicted RBP10.46□□□□□ -0.74
MSH6-201ENST00000234420 RUNX3Q13761 415 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 OR7A5Q15622 319 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 ECM1Q16610 540 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 TSSK4Q6SA08 328 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 APOOLQ6UXV4 268 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 FBXW12Q6X9E4 464 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 RFPL4BQ6ZWI9 263 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 GOLGA7Q7Z5G4 137 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 CPNE8Q86YQ8 564 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 OR5M8Q8NGP6 311 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 SLC45A3Q96JT2 553 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 FAM71F1Q96KD3 344 aaPredicted RBP10.46□□□□□ -0.74
MSH6-201ENST00000234420 GJD2Q9UKL4 321 aa10.46□□□□□ -0.74
MSH6-201ENST00000234420 MCTS1Q9ULC4 181 aaKnown RBP10.46□□□□□ -0.74
MSH6-201ENST00000234420 AQP7O14520 342 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SERPINA2P20848 420 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 CST6Q15828 149 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 CLDN19Q8N6F1 224 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NECAP1Q8NC96 275 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 WDR92Q96MX6 357 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 FAM189A1O60320 539 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 ADAMTS4O75173 837 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 FABP1P07148 127 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 THBS1P07996 1170 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 ZNF44P15621 663 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 KIAA0907Q7Z7F0 614 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 LRRC52Q8N7C0 313 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SLC29A1Q99808 456 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SRRQ9GZT4 340 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 CLCF1Q9UBD9 225 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 KDM4FA0A1W2PPD8 638 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 LRIT2A6NDA9 550 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 TGM5O43548 720 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SCGB1C2P0DMR2 95 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NTSR1P30989 418 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 RABIFP47224 123 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 IL17FQ96PD4 163 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SLC25A31Q9H0C2 315 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 HRASLSQ9HDD0 168 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 FBXO8Q9NRD0 319 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 FBXW11Q9UKB1 542 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 RNF11Q9Y3C5 154 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 A3GALT2U3KPV4 340 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NUP205Q92621 2012 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SPAG17Q6Q759 2223 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 IQGAP1P46940 1657 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NAP1L6A6NFF2 107 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 PLSCR1O15162 318 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NFYAP23511 347 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 HOXD11P31277 338 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 PCLAFQ15004 111 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 ENPP6Q6UWR7 440 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 CAMKMTQ7Z624 323 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 KIAA1958Q8N8K9 716 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 OR8J1Q8NGP2 316 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 DOHHQ9BU89 302 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 HS3ST4Q9Y661 456 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SCAMP2O15127 329 aaKnown RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 SEC14L2O76054 403 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 PBX1P40424 430 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 RAP2BP61225 183 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 PIN1Q13526 163 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 SLC9A3R2Q15599 337 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 SLC6A19Q695T7 634 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 LYPD8Q6UX82 237 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 NRARPQ7Z6K4 114 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 OR52E2Q8NGJ4 325 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 PIGCQ92535 297 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 DIP2BQ9P265 1576 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 FAAHO00519 579 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 ONECUT2O95948 504 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 IGHV3-9P01782 118 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 HLA-DQB2P05538 268 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 IL1RNP18510 177 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 RHCEP18577 417 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 TRHRP34981 398 aaPredicted RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 GIPRP48546 466 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 RACK1P63244 317 aaKnown RBP10.45□□□□□ -0.74
MSH6-201ENST00000234420 LIPJQ5W064 366 aa10.45□□□□□ -0.74
MSH6-201ENST00000234420 OGFOD3Q6PK18 319 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms