RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 ARSGQ96EG1 525 aa10.85□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZC3H10Q96K80 434 aaKnown RBP10.85□□□□□ -0.67
TNFAIP1-201ENST00000226225 C1QTNF6Q9BXI9 259 aa10.85□□□□□ -0.67
TNFAIP1-201ENST00000226225 NPAP1Q9NZP6 1156 aa10.85□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAM186AA6NE01 2351 aa10.85□□□□□ -0.67
TNFAIP1-201ENST00000226225 DUXAA6NLW8 204 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 C10orf142B7Z368 130 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 HMGN4O00479 90 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 PDE9AO76083 593 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 IFNW1P05000 195 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ANXA8P13928 327 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CTBP2P56545 445 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 RBBP4Q09028 425 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 VEZF1Q14119 521 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAM53BQ14153 422 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 DUSP7Q16829 419 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 PRTGQ2VWP7 1150 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 DDI2Q5TDH0 399 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC23A3Q6PIS1 610 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZBTB44Q8NCP5 570 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 METTL21AQ8WXB1 218 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TSLPQ969D9 159 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TSSK6Q9BXA6 273 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 GABARAPL3Q9BY60 117 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 MIXL1Q9H2W2 232 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 RXFP3Q9NSD7 469 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 KLHL28Q9NXS3 571 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TMEM184BQ9Y519 407 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 IGHV3-20A0A0C4DH32 117 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TRBV4-1A0A0J9YWV2 114 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CDC14CA4D256 554 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TDGF1P13385 188 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 PCGF2P35227 344 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 C1DQ13901 141 aaKnown RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF311Q5JNZ3 666 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 MTFR2Q6P444 385 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CNIH2Q6PI25 160 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 IL20RBQ6UXL0 311 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ZNF574Q6ZN55 896 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 C17orf82Q86X59 251 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 OR52P1PQ8NH57 321 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 MR1Q95460 341 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ACTRT3Q9BYD9 372 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CES1P1Q9UKY3 287 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 MN1Q10571 1320 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 C4orf47A7E2U8 309 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 C17orf105B2RV13 164 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CYR61O00622 381 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 GCM2O75603 506 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 ERP29P30040 261 aaKnown RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CCR4P51679 360 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 RPS25P62851 125 aaKnown RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 LSM11P83369 360 aaKnown RBP eCLIP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 GNA13Q14344 377 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 SLC35F1Q5T1Q4 408 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 GARNL3Q5VVW2 1013 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 RBM45Q8IUH3 476 aaKnown RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 AGBL5Q8NDL9 886 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 GOT1L1Q8NHS2 421 aaPredicted RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 TXNL4BQ9NX01 149 aaKnown RBP10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 OCIAD1Q9NX40 245 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 CTSFQ9UBX1 484 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
TNFAIP1-201ENST00000226225 IGHV5-10-1A0A0J9YXX1 117 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 C2orf92A0A1B0GVN3 265 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 HYAL3O43820 417 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 FCMRO60667 390 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 JMJD7P0C870 316 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 ARAFP10398 606 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 UBL4AP11441 157 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CRISP1P54107 249 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 FGFBP1Q14512 234 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 BCL2L15Q5TBC7 163 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 LHFPL3Q86UP9 236 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 LAPTM4BQ86VI4 370 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 BEST4Q8NFU0 473 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 OR52E4Q8NGH9 312 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 ZFAND1Q8TCF1 268 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 KLHL6Q8WZ60 621 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 MS4A4EQ96PG1 132 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CDK2AP1O14519 115 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 FABP7O15540 132 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CTNSO60931 367 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CH25HO95992 272 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 KLK3P07288 261 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 SMIM10L1P0DMW3 83 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CCL4P13236 92 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 CRYBB2P43320 205 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 GZMKP49863 264 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 TARDBPQ13148 414 aaKnown RBP eCLIP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 PWWP2BQ6NUJ5 590 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 WDR74Q6RFH5 385 aaPredicted RBP10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 TMEM151BQ8IW70 566 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 UPRTQ96BW1 309 aa10.83□□□□□ -0.68
TNFAIP1-201ENST00000226225 SMIM10Q96HG1 83 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms