RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 C7P10643 843 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 PKLRP30613 574 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 NKPD1Q17RQ9 610 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 PYCR3Q53H96 274 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SBSNQ6UWP8 590 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 AAED1Q7RTV5 226 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 OR13C2Q8NGS9 318 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SLC2A12Q8TD20 617 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SCGB1C1Q8TD33 95 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 LCORQ96JN0 433 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 TUBA1CQ9BQE3 449 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 C1QTNF2Q9BXJ5 285 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 POTEKPQ9BYX7 375 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 SYT4Q9H2B2 425 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 KIR3DX1Q9H7L2 352 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 NOSIPQ9Y314 301 aaKnown RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 BMP4P12644 408 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 RAB3AP20336 220 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 GABRR1P24046 479 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 MOGQ16653 247 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 RNASE10Q5GAN6 216 aaKnown RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 C6orf15Q6UXA7 325 aaPredicted RBP17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ASB12Q8WXK4 309 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 ERVK13-1Q9NX77 482 aa17.21■□□□□ 0.35
CLIP2-201ENST00000223398 FAM166BA8MTA8 275 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 ARNTLO00327 626 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 NCS1P62166 190 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 DEFA5Q01523 94 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 EIF5AL1Q6IS14 154 aaKnown RBP17.21■□□□□ 0.34
CLIP2-201ENST00000223398 IL17RDQ8NFM7 739 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 TMEM68Q96MH6 324 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 ATG4BQ9Y4P1 393 aa17.21■□□□□ 0.34
CLIP2-201ENST00000223398 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 LOC102725191A0A1B0GVB3 256 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 SLC43A1O75387 559 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 SLC22A10Q63ZE4 541 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 OR7E24Q6IFN5 339 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 LANCL3Q6ZV70 420 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 OLIG3Q7RTU3 272 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 UBALD2Q8IYN6 164 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 OR5H2Q8NGV7 314 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 SLCO2B1O94956 709 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 HLCSP50747 726 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
CLIP2-201ENST00000223398 TBC1D15Q8TC07 691 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 ST6GALNAC5Q9BVH7 336 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 VN1R3Q9BXE9 311 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 TP63Q9H3D4 680 aaPredicted RBP17.2■□□□□ 0.34
CLIP2-201ENST00000223398 WASH6PQ9NQA3 447 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 GABRA2P47869 451 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 TMBIM6P55061 237 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 GPLD1P80108 840 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 METRNLQ641Q3 311 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 ZNF585AQ6P3V2 769 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 TMEM178AQ8NBL3 297 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 ITFG2Q969R8 447 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 OR2S2Q9NQN1 319 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 ZNF223Q9UK11 482 aaPredicted RBP17.2■□□□□ 0.34
CLIP2-201ENST00000223398 MYO10Q9HD67 2058 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 NPPBP16860 134 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 CFAP77Q6ZQR2 320 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 MOB3CQ70IA8 216 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 ZNF597Q96LX8 424 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 PLEKHJ1Q9NW61 149 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 USP22Q9UPT9 525 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 EMC9Q9Y3B6 208 aa17.2■□□□□ 0.34
CLIP2-201ENST00000223398 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 AMY2AP04746 511 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 CD1CP29017 333 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 HTR5AP47898 357 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 HYAL1Q12794 435 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 AFMIDQ63HM1 303 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 FKBP14Q9NWM8 211 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 OR14J1Q9UGF5 321 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 KCNN3Q9UGI6 736 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 TMEM184BQ9Y519 407 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-201ENST00000223398 HSPE1-MOB4S4R3N1 261 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 A0A0A6YYH2 397 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 SERINC4A6NH21 518 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 A6NJ64 397 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 SLC6A19Q695T7 634 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 MARCH3Q86UD3 253 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 MINDY2Q8NBR6 621 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 GPR148Q8TDV2 347 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 TM4SF18Q96CE8 201 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 MYEOVQ96EZ4 313 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 ZC3HAV1LQ96H79 300 aaKnown RBP17.19■□□□□ 0.34
CLIP2-201ENST00000223398 EDEM2Q9BV94 578 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 EGLN3Q9H6Z9 239 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 OTOL1A6NHN0 477 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-201ENST00000223398 TNFRSF10CO14798 259 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 KNG1P01042 644 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 LCN1P31025 176 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 DLSTP36957 453 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 PFN3P60673 137 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 PSPHP78330 225 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 SNTB2Q13425 540 aaKnown RBP17.19■□□□□ 0.34
CLIP2-201ENST00000223398 FAM57BQ71RH2 274 aa17.19■□□□□ 0.34
CLIP2-201ENST00000223398 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms